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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA557436" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA557436 · 19 ✖

analysis 1

  • blastn · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
535645 535645 PRJNA557436_S_NODE_4181_length_196_cov_4.968944_g4133_i0 PRJNA557436 4181 196 4.968944 9.73913024 Verticillium dahliae 27337 Fungi Fungi 329 6.99e-86   NTclustered gi|6537145|gb|AF104926.1|AF104926 27337 g4133 i0 96.954 100.484693877551 197 4 100 2 1 196 5239 5434 Verticillium dahliae 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 19695 329 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Verticillium Verticillium dahliae
1128240 1128240 PRJNA557436_S_NODE_2561_length_237_cov_11.985149_g2513_i0 PRJNA557436 2561 237 11.985149 28.40480313 Eukaryota 2759 Fungi Fungi 409 1.1e-109   NTclustered gi|1280049812|gb|MF072571.1| 29917 g2513 i0 100 93.2489451476793 221 0 93 0 1 221 260 40 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 22100 409 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
2403681 2403681 PRJNA557436_S_NODE_5062_length_183_cov_6.337838_g5014_i0 PRJNA557436 5062 183 6.337838 11.59824354 Ascomycota 4890 Fungi Fungi 339 1.07e-88   NTclustered gi|2310839299|gb|OP550095.1| 5059 g5014 i0 100 100 183 0 100 0 1 183 565 747 Aspergillus flavus isolate Re-10 large subunit ribosomal RNA gene, partial sequence blastn 18300 339 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus flavus
2403693 2403693 PRJNA557436_S_NODE_8542_length_154_cov_4.705882_g8494_i0 PRJNA557436 8542 154 4.705882 7.24705828 Fungi 4751 Fungi Fungi 285 1.14e-72   NTclustered gi|2047428661|gb|MZ330753.1| 5599 g8494 i0 100 100 154 0 100 0 1 154 1365 1212 Alternaria alternata strain SALIM.A.H small subunit ribosomal RNA gene, partial sequence blastn 15400 285 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
4362981 4362981 PRJNA557436_S_NODE_6264_length_170_cov_1.925926_g6216_i0 PRJNA557436 6264 170 1.925926 3.2740742 Pseudocercospora fijiensis 1873960 Fungi Fungi 65.8 1.83e-6   NTclustered gi|631387901|ref|XM_007930140.1| 383855 g6216 i0 97.368 70.3176470588235 38 1 22 0 123 160 3468 3431 Pseudocercospora fijiensis CIRAD86 uncharacterized protein (MYCFIDRAFT_176360), partial mRNA blastn 11954 65.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Pseudocercospora Pseudocercospora fijiensis
6231950 6231950 PRJNA557436_S_NODE_925_length_372_cov_8.893175_g877_i0 PRJNA557436 925 372 8.893175 33.082611 Ascomycota 4890 Fungi Fungi 621 2.1499999999999998e-173   NTclustered gi|1078193887|gb|KU844333.1| 38038 g877 i0 96.783 100.274193548387 373 11 100 1 1 372 751 1123 Rhynchosporium secalis isolate 02CH4-6a.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 37302 627 0.990430622009569 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Ploettnerulaceae Rhynchosporium Rhynchosporium secalis
7506312 7506312 PRJNA557436_S_NODE_1406_length_309_cov_4.299270_g1358_i0 PRJNA557436 1406 309 4.29927 13.2847443 Plectosphaerellaceae 1033978 Fungi Fungi 521 1.8299999999999998e-143   NTclustered gi|1473259642|gb|MH872586.1| 132135 g1358 i0 99.649 91.3915857605178 285 1 92 0 25 309 15 299 Musicillium theobromae culture CBS:243.74 strain CBS 243.74 large subunit ribosomal RNA gene, partial sequence blastn 28240 521 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Musicillium Musicillium theobromae
7506324 7506324 PRJNA557436_S_NODE_7106_length_163_cov_10.531250_g7058_i0 PRJNA557436 7106 163 10.53125 17.1659375 root 1 Root_unresolved Root_unresolved 302 1.22e-77   NTclustered gi|1280049812|gb|MF072571.1| 29917 g7058 i0 100 100 163 0 100 0 1 163 553 715 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 16300 302 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
8188577 8188577 PRJNA557436_S_NODE_4067_length_198_cov_3.398773_g4019_i0 PRJNA557436 4067 198 3.398773 6.72957054 uncultured Readeriella 1193705 Fungi Fungi 361 2.51e-95   NTclustered gi|453201589|gb|JQ999569.1| 1193705 g4019 i0 99.495 105.444444444444 198 1 100 0 1 198 414 217 Uncultured Readeriella clone GKJWQY101AXTXW 28S ribosomal RNA gene, partial sequence blastn 20878 361 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Capnodiales     uncultured Readeriella
10739836 10739836 PRJNA557436_S_NODE_6849_length_165_cov_2.515385_g6801_i0 PRJNA557436 6849 165 2.515385 4.15038525 Alternaria conjuncta 181017 Fungi Fungi 56.5 0.001   NTclustered gi|2323894461|ref|XM_051472797.1| 181017 g6801 i0 100 1.04848484848485 30 0 18 0 128 157 2468 2439 Alternaria conjuncta uncharacterized protein (J4E85_008573), partial mRNA blastn 173 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria conjuncta
13882189 13882189 PRJNA557436_S_NODE_2771_length_229_cov_23.324742_g2723_i0 PRJNA557436 2771 229 23.324742 53.41365918 Ascomycota 4890 Fungi Fungi 235 1.89e-57   NTclustered gi|283827979|gb|DQ008163.2| 5499 g2723 i0 100 103.056768558952 127 0 100 0 103 229 2371 2497 Passalora fulva strain CBS 119.46 28S large subunit ribosomal RNA gene, partial sequence blastn 23600 235 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Fulvia Fulvia fulva
13882190 13882190 PRJNA557436_S_NODE_2871_length_226_cov_7.287958_g2823_i0 PRJNA557436 2871 226 7.287958 16.47078508 Cladosporium 5498 Fungi Fungi 414 2.23e-111   NTclustered gi|283827952|gb|EU019262.2| 29917 g2823 i0 100 25.5929203539823 224 0 99 0 3 226 3275 3052 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 5784 414 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
13882191 13882191 PRJNA557436_S_NODE_3051_length_221_cov_21.134409_g3003_i0 PRJNA557436 3051 221 21.134409 46.70704389 Eukaryota 2759 Fungi Fungi 287 4.93e-73   NTclustered gi|1759050544|gb|CP039677.1| 13684 g3003 i0 98.758 96.2398190045249 161 2 89 0 41 201 1301484 1301324 Parastagonospora nodorum strain Sn79 chromosome 12 blastn 21269 287 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Parastagonospora Parastagonospora nodorum
15838473 15838473 PRJNA557436_S_NODE_4253_length_195_cov_2.662500_g4205_i0 PRJNA557436 4253 195 2.6625 5.191875 Musicillium theobromae 132135 Fungi Fungi 361 2.46e-95   NTclustered gi|1561109618|emb|LR025909.1| 132135 g4205 i0 100 99.9948717948718 195 0 100 0 1 195 408 602 Musicillium theobromae genomic DNA sequence contains 28S rRNA gene blastn 19499 361 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Musicillium Musicillium theobromae
17706212 17706212 PRJNA557436_S_NODE_2134_length_257_cov_13.941441_g2086_i0 PRJNA557436 2134 257 13.941441 35.82950337 Eukaryota 2759 Fungi Fungi 470 5.45e-128   NTclustered gi|2532687033|gb|OR243761.1| 29917 g2086 i0 99.611 99.9805447470817 257 1 100 0 1 257 3662 3918 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25695 470 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
24080182 24080182 PRJNA557436_S_NODE_4359_length_193_cov_28.474684_g4311_i0 PRJNA557436 4359 193 28.474684 54.95614012 root 1 Root_unresolved Root_unresolved 351 1.46e-92   NTclustered gi|1331395967|gb|MG815782.1| 5539 g4311 i0 99.482 100 193 1 100 0 1 193 5034 4842 Scytalidium lignicola strain DSM 105466 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19300 351 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes     Scytalidium Scytalidium lignicola
25354522 25354522 PRJNA557436_S_NODE_2160_length_256_cov_8.846154_g2112_i0 PRJNA557436 2160 256 8.846154 22.64615424 Ascomycota 4890 Fungi Fungi 462 9.07e-126   NTclustered gi|283827952|gb|EU019262.2| 29917 g2112 i0 99.219 100.0078125 256 2 100 0 1 256 1919 2174 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 25602 462 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
25354531 25354531 PRJNA557436_S_NODE_4180_length_196_cov_17.118012_g4132_i0 PRJNA557436 4180 196 17.118012 33.55130352 Eukaryota 2759 Fungi Fungi 363 6.899999999999998e-96   NTclustered gi|2532687033|gb|OR243761.1| 29917 g4132 i0 100 100.239795918367 196 0 100 0 1 196 4089 3894 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19647 363 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
25354547 25354547 PRJNA557436_S_NODE_8540_length_154_cov_9.058824_g8492_i0 PRJNA557436 8540 154 9.058824 13.95058896 Eukaryota 2759 Fungi Fungi 285 1.14e-72   NTclustered gi|2532687033|gb|OR243761.1| 29917 g8492 i0 100 99.0974025974026 154 0 100 0 1 154 3673 3520 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15261 285 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;