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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA557436" and tax_kingdom = "Fungi"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA557436 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
535645 535645 PRJNA557436_S_NODE_4181_length_196_cov_4.968944_g4133_i0 PRJNA557436 4181 196 4.968944 9.73913024 Verticillium dahliae 27337 Fungi Fungi 329 6.99e-86   NTclustered gi|6537145|gb|AF104926.1|AF104926 27337 g4133 i0 96.954 100.484693877551 197 4 100 2 1 196 5239 5434 Verticillium dahliae 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 19695 329 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Verticillium Verticillium dahliae
1128237 1128237 PRJNA557436_S_NODE_1861_length_273_cov_2.121849_g1813_i0 PRJNA557436 1861 273 2.121849 5.79264777 Opisthokonta 33154 Fungi Fungi 505 1.6e-138   NTclustered gi|915512607|gb|KP825390.1| 76775 g1813 i0 100 100.267399267399 273 0 100 0 1 273 506 234 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 27373 505 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
1128240 1128240 PRJNA557436_S_NODE_2561_length_237_cov_11.985149_g2513_i0 PRJNA557436 2561 237 11.985149 28.40480313 Eukaryota 2759 Fungi Fungi 409 1.1e-109   NTclustered gi|1280049812|gb|MF072571.1| 29917 g2513 i0 100 93.2489451476793 221 0 93 0 1 221 260 40 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 22100 409 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
2403681 2403681 PRJNA557436_S_NODE_5062_length_183_cov_6.337838_g5014_i0 PRJNA557436 5062 183 6.337838 11.59824354 Ascomycota 4890 Fungi Fungi 339 1.07e-88   NTclustered gi|2310839299|gb|OP550095.1| 5059 g5014 i0 100 100 183 0 100 0 1 183 565 747 Aspergillus flavus isolate Re-10 large subunit ribosomal RNA gene, partial sequence blastn 18300 339 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus flavus
2403693 2403693 PRJNA557436_S_NODE_8542_length_154_cov_4.705882_g8494_i0 PRJNA557436 8542 154 4.705882 7.24705828 Fungi 4751 Fungi Fungi 285 1.14e-72   NTclustered gi|2047428661|gb|MZ330753.1| 5599 g8494 i0 100 100 154 0 100 0 1 154 1365 1212 Alternaria alternata strain SALIM.A.H small subunit ribosomal RNA gene, partial sequence blastn 15400 285 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
4362981 4362981 PRJNA557436_S_NODE_6264_length_170_cov_1.925926_g6216_i0 PRJNA557436 6264 170 1.925926 3.2740742 Pseudocercospora fijiensis 1873960 Fungi Fungi 65.8 1.83e-6   NTclustered gi|631387901|ref|XM_007930140.1| 383855 g6216 i0 97.368 70.3176470588235 38 1 22 0 123 160 3468 3431 Pseudocercospora fijiensis CIRAD86 uncharacterized protein (MYCFIDRAFT_176360), partial mRNA blastn 11954 65.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Pseudocercospora Pseudocercospora fijiensis
6231950 6231950 PRJNA557436_S_NODE_925_length_372_cov_8.893175_g877_i0 PRJNA557436 925 372 8.893175 33.082611 Ascomycota 4890 Fungi Fungi 621 2.1499999999999998e-173   NTclustered gi|1078193887|gb|KU844333.1| 38038 g877 i0 96.783 100.274193548387 373 11 100 1 1 372 751 1123 Rhynchosporium secalis isolate 02CH4-6a.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 37302 627 0.990430622009569 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Ploettnerulaceae Rhynchosporium Rhynchosporium secalis
7506311 7506311 PRJNA557436_S_NODE_1026_length_356_cov_3.700935_g978_i0 PRJNA557436 1026 356 3.700935 13.1753286 Ustilago 5269 Fungi Fungi 599 9.599999999999997e-167   NTclustered gi|1828307496|gb|MT279744.1| 249490 g978 i0 99.394 91.6404494382023 330 2 93 0 1 330 626 297 Ustilago sparsa isolate 2Y82 large subunit ribosomal RNA gene, partial sequence blastn 32624 599 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Ustilago Ustilago sparsa
7506312 7506312 PRJNA557436_S_NODE_1406_length_309_cov_4.299270_g1358_i0 PRJNA557436 1406 309 4.29927 13.2847443 Plectosphaerellaceae 1033978 Fungi Fungi 521 1.8299999999999998e-143   NTclustered gi|1473259642|gb|MH872586.1| 132135 g1358 i0 99.649 91.3915857605178 285 1 92 0 25 309 15 299 Musicillium theobromae culture CBS:243.74 strain CBS 243.74 large subunit ribosomal RNA gene, partial sequence blastn 28240 521 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Musicillium Musicillium theobromae
7506324 7506324 PRJNA557436_S_NODE_7106_length_163_cov_10.531250_g7058_i0 PRJNA557436 7106 163 10.53125 17.1659375 root 1 Root_unresolved Root_unresolved 302 1.22e-77   NTclustered gi|1280049812|gb|MF072571.1| 29917 g7058 i0 100 100 163 0 100 0 1 163 553 715 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 16300 302 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
7506327 7506327 PRJNA557436_S_NODE_7266_length_162_cov_2.078740_g7218_i0 PRJNA557436 7266 162 2.07874 3.3675588 Ustilaginaceae 5268 Fungi Fungi 274 2.64e-69   NTclustered gi|51860196|gb|AF009881.2| 63396 g7218 i0 100 90.0493827160494 148 0 91 0 15 162 58 205 Ustilago cynodontis large subunit ribosomal RNA gene, partial sequence blastn 14588 274 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Ustilago Ustilago cynodontis
8188577 8188577 PRJNA557436_S_NODE_4067_length_198_cov_3.398773_g4019_i0 PRJNA557436 4067 198 3.398773 6.72957054 uncultured Readeriella 1193705 Fungi Fungi 361 2.51e-95   NTclustered gi|453201589|gb|JQ999569.1| 1193705 g4019 i0 99.495 105.444444444444 198 1 100 0 1 198 414 217 Uncultured Readeriella clone GKJWQY101AXTXW 28S ribosomal RNA gene, partial sequence blastn 20878 361 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Capnodiales     uncultured Readeriella
8188589 8188589 PRJNA557436_S_NODE_5747_length_175_cov_1.928571_g5699_i0 PRJNA557436 5747 175 1.928571 3.37499925 Lentinula edodes 5353 Fungi Fungi 52.8 0.015   NTclustered gi|2185503315|ref|XM_046224946.1| 5353 g5699 i0 100 0.16 28 0 16 0 39 66 2428 2455 Lentinula edodes uncharacterized protein (C8R40DRAFT_1054715), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
10056818 10056818 PRJNA557436_S_NODE_6988_length_164_cov_2.310078_g6940_i0 PRJNA557436 6988 164 2.310078 3.78852792 Fungi 4751 Fungi Fungi 303 3.42e-78   NTclustered gi|5232|emb|X62396.1| 5270 g6940 i0 100 100 164 0 100 0 1 164 743 906 U.maydis gene for small subunit ribosomal RNA blastn 16400 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
10739836 10739836 PRJNA557436_S_NODE_6849_length_165_cov_2.515385_g6801_i0 PRJNA557436 6849 165 2.515385 4.15038525 Alternaria conjuncta 181017 Fungi Fungi 56.5 0.001   NTclustered gi|2323894461|ref|XM_051472797.1| 181017 g6801 i0 100 1.04848484848485 30 0 18 0 128 157 2468 2439 Alternaria conjuncta uncharacterized protein (J4E85_008573), partial mRNA blastn 173 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria conjuncta
13289733 13289733 PRJNA557436_S_NODE_4891_length_185_cov_15.053333_g4843_i0 PRJNA557436 4891 185 15.053333 27.84866605 uncultured fungus 175245 Fungi Fungi 315 1.8199999999999998e-81   NTclustered gi|507138350|gb|KC669943.1| 175245 g4843 i0 97.297 100 185 5 100 0 1 185 1475 1659 Uncultured fungus clone nco33g12c1 18S ribosomal RNA gene, partial sequence blastn 18500 315 1 Eukaryota Opisthokonta Fungi           uncultured fungus
13882189 13882189 PRJNA557436_S_NODE_2771_length_229_cov_23.324742_g2723_i0 PRJNA557436 2771 229 23.324742 53.41365918 Ascomycota 4890 Fungi Fungi 235 1.89e-57   NTclustered gi|283827979|gb|DQ008163.2| 5499 g2723 i0 100 103.056768558952 127 0 100 0 103 229 2371 2497 Passalora fulva strain CBS 119.46 28S large subunit ribosomal RNA gene, partial sequence blastn 23600 235 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Fulvia Fulvia fulva
13882190 13882190 PRJNA557436_S_NODE_2871_length_226_cov_7.287958_g2823_i0 PRJNA557436 2871 226 7.287958 16.47078508 Cladosporium 5498 Fungi Fungi 414 2.23e-111   NTclustered gi|283827952|gb|EU019262.2| 29917 g2823 i0 100 25.5929203539823 224 0 99 0 3 226 3275 3052 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 5784 414 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
13882191 13882191 PRJNA557436_S_NODE_3051_length_221_cov_21.134409_g3003_i0 PRJNA557436 3051 221 21.134409 46.70704389 Eukaryota 2759 Fungi Fungi 287 4.93e-73   NTclustered gi|1759050544|gb|CP039677.1| 13684 g3003 i0 98.758 96.2398190045249 161 2 89 0 41 201 1301484 1301324 Parastagonospora nodorum strain Sn79 chromosome 12 blastn 21269 287 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Parastagonospora Parastagonospora nodorum
13882199 13882199 PRJNA557436_S_NODE_6971_length_164_cov_3.782946_g6923_i0 PRJNA557436 6971 164 3.782946 6.20403144 Malassezia 55193 Fungi Fungi 303 3.42e-78   NTclustered gi|953821272|gb|KT310070.1| 76773 g6923 i0 100 99.6158536585366 164 0 100 0 1 164 832 669 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 16337 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
15838473 15838473 PRJNA557436_S_NODE_4253_length_195_cov_2.662500_g4205_i0 PRJNA557436 4253 195 2.6625 5.191875 Musicillium theobromae 132135 Fungi Fungi 361 2.46e-95   NTclustered gi|1561109618|emb|LR025909.1| 132135 g4205 i0 100 99.9948717948718 195 0 100 0 1 195 408 602 Musicillium theobromae genomic DNA sequence contains 28S rRNA gene blastn 19499 361 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Musicillium Musicillium theobromae
17113438 17113438 PRJNA557436_S_NODE_1974_length_266_cov_2.095238_g1926_i0 PRJNA557436 1974 266 2.095238 5.57333308 Malassezia restricta 76775 Fungi Fungi 492 1.2099999999999999e-134   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g1926 i0 100 84.8308270676692 266 0 100 0 1 266 1543 1808 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 22565 492 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17706212 17706212 PRJNA557436_S_NODE_2134_length_257_cov_13.941441_g2086_i0 PRJNA557436 2134 257 13.941441 35.82950337 Eukaryota 2759 Fungi Fungi 470 5.45e-128   NTclustered gi|2532687033|gb|OR243761.1| 29917 g2086 i0 99.611 99.9805447470817 257 1 100 0 1 257 3662 3918 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25695 470 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
20254800 20254800 PRJNA557436_S_NODE_996_length_361_cov_2.475460_g948_i0 PRJNA557436 996 361 2.47546 8.9364106 Ustilaginaceae 5268 Fungi Fungi 662 0   NTclustered gi|1358186638|gb|MH047195.1| 5270 g948 i0 99.723 98.5429362880886 361 1 100 0 1 361 4780 4420 Mycosarcoma maydis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 35574 662 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
22805443 22805443 PRJNA557436_S_NODE_1858_length_273_cov_3.575630_g1810_i0 PRJNA557436 1858 273 3.57563 9.7614699 Eukaryota 2759 Fungi Fungi 501 2.07e-137   NTclustered gi|315360799|gb|HQ108161.1| 175244 g1810 i0 100 98.9047619047619 271 0 99 0 3 273 1 271 Uncultured Basidiomycota clone Gi_gi_3 28S ribosomal RNA gene, partial sequence blastn 27001 505 0.992079207920792 Eukaryota Opisthokonta Fungi Basidiomycota         uncultured Basidiomycota
24080178 24080178 PRJNA557436_S_NODE_2879_length_226_cov_2.293194_g2831_i0 PRJNA557436 2879 226 2.293194 5.18261844 Basidiomycota 5204 Fungi Fungi 363 8.179999999999999e-96   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2831 i0 95.964 143.933628318584 223 9 99 0 4 226 1540 1318 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 32529 363 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24080182 24080182 PRJNA557436_S_NODE_4359_length_193_cov_28.474684_g4311_i0 PRJNA557436 4359 193 28.474684 54.95614012 root 1 Root_unresolved Root_unresolved 351 1.46e-92   NTclustered gi|1331395967|gb|MG815782.1| 5539 g4311 i0 99.482 100 193 1 100 0 1 193 5034 4842 Scytalidium lignicola strain DSM 105466 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19300 351 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes     Scytalidium Scytalidium lignicola
24761908 24761908 PRJNA557436_S_NODE_3660_length_206_cov_5.064327_g3612_i0 PRJNA557436 3660 206 5.064327 10.43251362 uncultured fungus 175245 Fungi Fungi 305 1.25e-78   NTclustered gi|571106827|gb|JX363104.1| 175245 g3612 i0 94.03 95.5339805825243 201 12 98 0 6 206 391 191 Uncultured fungus clone 035A8579 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 19680 305 1 Eukaryota Opisthokonta Fungi           uncultured fungus
25354522 25354522 PRJNA557436_S_NODE_2160_length_256_cov_8.846154_g2112_i0 PRJNA557436 2160 256 8.846154 22.64615424 Ascomycota 4890 Fungi Fungi 462 9.07e-126   NTclustered gi|283827952|gb|EU019262.2| 29917 g2112 i0 99.219 100.0078125 256 2 100 0 1 256 1919 2174 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 25602 462 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
25354531 25354531 PRJNA557436_S_NODE_4180_length_196_cov_17.118012_g4132_i0 PRJNA557436 4180 196 17.118012 33.55130352 Eukaryota 2759 Fungi Fungi 363 6.899999999999998e-96   NTclustered gi|2532687033|gb|OR243761.1| 29917 g4132 i0 100 100.239795918367 196 0 100 0 1 196 4089 3894 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19647 363 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
25354547 25354547 PRJNA557436_S_NODE_8540_length_154_cov_9.058824_g8492_i0 PRJNA557436 8540 154 9.058824 13.95058896 Eukaryota 2759 Fungi Fungi 285 1.14e-72   NTclustered gi|2532687033|gb|OR243761.1| 29917 g8492 i0 100 99.0974025974026 154 0 100 0 1 154 3673 3520 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15261 285 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;