RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA556992 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9462428 9462428 PRJNA556992_P_NODE_852688_length_243_cov_1.882353_g850498_i0 PRJNA556992 852688 243 1.882353 4.57411779 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 172 1.6099999999999996e-38   NTclustered gi|2874254122|emb|OY970207.1| 3107663 g850498 i0 80.687 1.10699588477366 233 35 94 10 15 242 1988875 1988648 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10113.bin.c.5 genome assembly, chromosome: 1 blastn 269 172 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
10735901 10735901 PRJNA556992_P_NODE_684709_length_252_cov_2.189944_g682520_i0 PRJNA556992 684709 252 2.189944 5.51865888 Vulcanimicrobium alpinum 3016050 Bacteria Bacteria 65.8 2.94e-6   NTclustered gi|2416250577|dbj|AP025523.1| 3016050 g682520 i0 86.441 0.599206349206349 59 8 23 0 151 209 1459298 1459240 Vulcanimicrobium alpinum WC8-2 DNA, complete genome blastn 151 65.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Vulcanimicrobium Vulcanimicrobium alpinum
18383384 18383384 PRJNA556992_P_NODE_662155_length_254_cov_1.580110_g659966_i0 PRJNA556992 662155 254 1.58011 4.0134794 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 134 8.01e-27   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g659966 i0 80 8.57086614173228 195 28 75 11 64 254 2483907 2483720 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 2177 134 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
19653507 19653507 PRJNA556992_P_NODE_318656_length_286_cov_1.830986_g316467_i0 PRJNA556992 318656 286 1.830986 5.23661996 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 169 2.52e-37   NTclustered gi|2874254122|emb|OY970207.1| 3107663 g316467 i0 80.349 39.0629370629371 229 39 79 6 59 284 2422471 2422246 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10113.bin.c.5 genome assembly, chromosome: 1 blastn 11172 169 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23480329 23480329 PRJNA556992_P_NODE_378059_length_279_cov_1.427184_g375870_i0 PRJNA556992 378059 279 1.427184 3.98184336 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 270 6.519999999999999e-68   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g375870 i0 89.238 49.5017921146953 223 15 80 3 1 223 2484020 2483807 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 13811 270 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23486644 23486644 PRJNA556992_P_NODE_877459_length_242_cov_0.911243_g875269_i0 PRJNA556992 877459 242 0.911243 2.20520806 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 187 5.73e-43   NTclustered gi|2874253953|emb|OY970278.1| 3107663 g875269 i0 80.833 75.2933884297521 240 44 99 2 4 242 743214 742976 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.10 genome assembly, chromosome: 1 blastn 18221 187 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
24751111 24751111 PRJNA556992_P_NODE_169840_length_345_cov_1.073529_g167652_i0 PRJNA556992 169840 345 1.073529 3.70367505 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 141 6.77e-29   NTclustered gi|2874253737|emb|OY969579.1| 3107663 g167652 i0 78.448 129.794202898551 232 38 65 11 1 225 3062487 3062261 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD01689.bin.c.2 genome assembly, chromosome: 1 blastn 44779 141 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
24753672 24753672 PRJNA556992_P_NODE_338280_length_283_cov_4.038095_g336091_i0 PRJNA556992 338280 283 4.038095 11.42780885 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.5 0.002   NTclustered gi|2874253824|emb|OY969808.1| 3107663 g336091 i0 86.792 0.798586572438163 53 3 19 4 119 171 3547964 3547916 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.1 genome assembly, chromosome: 1 blastn 226 56.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;