RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4955859 4955859 PRJNA556992_P_NODE_870744_length_242_cov_2.254438_g868554_i0 PRJNA556992 870744 242 2.254438 5.45573996 Candidatus Aciduliprofundum 379546 Archaea Archaea 165 2.68e-36   NTclustered gi|470485990|ref|NR_076728.1| 379547 g868554 i0 82.143 27.8801652892562 196 32 80 3 25 218 2441 2247 Aciduliprofundum boonei strain T469 23S ribosomal RNA gene, complete sequence blastn 6747 165 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Candidatus Aciduliprofundum boonei
12604313 12604313 PRJNA556992_P_NODE_203630_length_325_cov_2.400794_g201442_i0 PRJNA556992 203630 325 2.400794 7.8025805 Candidatus Methanogranum 1577789 Archaea Archaea 586 6.769999999999998e-163   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g201442 i0 99.381 18.6584615384615 323 2 99 0 3 325 1493103 1492781 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 6064 586 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
18376639 18376639 PRJNA556992_P_NODE_170175_length_344_cov_4.564576_g167987_i0 PRJNA556992 170175 344 4.564576 15.70214144 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 630 3.289999999999999e-176   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g167987 i0 99.709 15.7441860465116 344 1 100 0 1 344 1494729 1494386 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 5416 630 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
18376879 18376879 PRJNA556992_P_NODE_184175_length_336_cov_1.984791_g181987_i0 PRJNA556992 184175 336 1.984791 6.66889776 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 621 1.9299999999999997e-173   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g181987 i0 100 193.119047619048 336 0 100 0 1 336 1493782 1493447 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 64888 621 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
18383233 18383233 PRJNA556992_P_NODE_650075_length_255_cov_1.489011_g647886_i0 PRJNA556992 650075 255 1.489011 3.79697805 Cuniculiplasma divulgatum 1673428 Archaea Archaea 52.8 0.023   NTclustered gi|2573965583|gb|CP133595.1| 1673428 g647886 i0 100 0.109803921568627 28 0 11 0 148 175 1831325 1831298 MAG: Cuniculiplasma divulgatum isolate BR_06 chromosome, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Cuniculiplasmataceae Cuniculiplasma Cuniculiplasma divulgatum
20931964 20931964 PRJNA556992_P_NODE_536337_length_264_cov_2.000000_g534148_i0 PRJNA556992 536337 264 2 5.28 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 483 7.219999999999998e-132   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g534148 i0 99.621 133.128787878788 264 1 100 0 1 264 1495099 1494836 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 35146 483 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;