contig_metadata
52 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Spirochaetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 533730 | 533730 | PRJNA556992_P_NODE_850181_length_243_cov_2.523529_g847991_i0 | PRJNA556992 | 850181 | 243 | 2.523529 | 6.13217547 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 374 | 4.12e-99 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g847991 | i0 | 94.606 | 4.96707818930041 | 241 | 13 | 99 | 0 | 1 | 241 | 10518 | 10278 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 1207 | 374 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 1125510 | 1125510 | PRJNA556992_P_NODE_230641_length_311_cov_4.126050_g228453_i0 | PRJNA556992 | 230641 | 311 | 4.12605 | 12.8320155 | Treponema | 157 | Bacteria | Bacteria | 525 | 1.42e-144 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g228453 | i0 | 97.106 | 191.607717041801 | 311 | 9 | 100 | 0 | 1 | 311 | 2078393 | 2078703 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 59590 | 525 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 1797489 | 1797489 | PRJNA556992_P_NODE_1007422_length_229_cov_9.955128_g1005232_i0 | PRJNA556992 | 1007422 | 229 | 9.955128 | 22.79724312 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 62.1 | 3.39e-5 | NTclustered | gi|2189493055|gb|CP091738.1| | 167 | g1005232 | i0 | 97.222 | 0.310043668122271 | 36 | 1 | 16 | 0 | 82 | 117 | 1191571 | 1191606 | MAG: Treponema succinifaciens isolate nC27_bin.114.fa chromosome | blastn | 71 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 1797837 | 1797837 | PRJNA556992_P_NODE_1035442_length_227_cov_2.318182_g1033252_i0 | PRJNA556992 | 1035442 | 227 | 2.318182 | 5.26227314 | Treponema rectale | 744512 | Bacteria | Bacteria | 239 | 1.45e-58 | NTclustered | gi|1919550644|gb|CP031517.1| | 744512 | g1033252 | i0 | 85.714 | 587.039647577093 | 231 | 27 | 100 | 5 | 1 | 227 | 304077 | 303849 | Treponema rectale strain CHPA chromosome, complete genome | blastn | 133258 | 239 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema rectale | ||
| 1805023 | 1805023 | PRJNA556992_P_NODE_490402_length_268_cov_1.800000_g488213_i0 | PRJNA556992 | 490402 | 268 | 1.8 | 4.824 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 479 | 9.499999999999996e-131 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g488213 | i0 | 98.881 | 187.496268656716 | 268 | 3 | 100 | 0 | 1 | 268 | 753499 | 753766 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 50249 | 479 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 1807225 | 1807225 | PRJNA556992_P_NODE_673862_length_253_cov_1.711111_g671673_i0 | PRJNA556992 | 673862 | 253 | 1.711111 | 4.32911083 | Treponema vincentii | 69710 | Bacteria | Bacteria | 446 | 9.01e-121 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g671673 | i0 | 98.419 | 190.403162055336 | 253 | 4 | 100 | 0 | 1 | 253 | 2079616 | 2079868 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 48172 | 446 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 3080611 | 3080611 | PRJNA556992_P_NODE_513923_length_266_cov_1.595855_g511734_i0 | PRJNA556992 | 513923 | 266 | 1.595855 | 4.2449743 | Treponema medium | 58231 | Bacteria | Bacteria | 226 | 1.3499999999999998e-54 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g511734 | i0 | 82.375 | 2.95864661654135 | 261 | 44 | 98 | 2 | 6 | 265 | 2115495 | 2115236 | Treponema medium strain T19 chromosome, complete genome | blastn | 787 | 226 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 3085270 | 3085270 | PRJNA556992_P_NODE_886583_length_241_cov_3.196429_g884393_i0 | PRJNA556992 | 886583 | 241 | 3.196429 | 7.70339389 | Treponema bryantii | 163 | Bacteria | Bacteria | 265 | 2.5599999999999996e-66 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g884393 | i0 | 86.667 | 0.995850622406639 | 240 | 30 | 99 | 2 | 1 | 239 | 1379538 | 1379776 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 240 | 265 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 3676105 | 3676105 | PRJNA556992_P_NODE_1158063_length_199_cov_15.500000_g1155872_i0 | PRJNA556992 | 1158063 | 199 | 15.5 | 30.845 | Treponema | 157 | Bacteria | Bacteria | 219 | 1.6099999999999996e-52 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g1155872 | i0 | 86.432 | 5.98492462311558 | 199 | 27 | 100 | 0 | 1 | 199 | 501868 | 502066 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 1191 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 3676642 | 3676642 | PRJNA556992_P_NODE_207903_length_323_cov_1.456000_g205715_i0 | PRJNA556992 | 207903 | 323 | 1.456 | 4.70288 | Treponema | 157 | Bacteria | Bacteria | 597 | 3.11e-166 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g205715 | i0 | 100 | 196.730650154799 | 323 | 0 | 100 | 0 | 1 | 323 | 1014912 | 1014590 | Treponema medium strain T19 chromosome, complete genome | blastn | 63544 | 597 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 3677405 | 3677405 | PRJNA556992_P_NODE_395303_length_277_cov_1.705882_g393114_i0 | PRJNA556992 | 395303 | 277 | 1.705882 | 4.72529314 | Treponema | 157 | Bacteria | Bacteria | 490 | 4.56e-134 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g393114 | i0 | 98.556 | 196.736462093863 | 277 | 4 | 100 | 0 | 1 | 277 | 1845496 | 1845772 | Treponema medium strain T19 chromosome, complete genome | blastn | 54496 | 490 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 4355308 | 4355308 | PRJNA556992_P_NODE_386704_length_278_cov_1.502439_g384515_i0 | PRJNA556992 | 386704 | 278 | 1.502439 | 4.17678042 | Leptospira interrogans | 173 | Bacteria | Bacteria | 200 | 8.639999999999998e-47 | NTclustered | gi|2204328557|gb|CP092743.1| | 173 | g384515 | i0 | 80.297 | 71.9424460431655 | 269 | 49 | 96 | 2 | 12 | 278 | 1660698 | 1660432 | Leptospira interrogans strain FMAS_PD1 chromosome 1, complete sequence | blastn | 20000 | 200 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira interrogans | ||
| 4953031 | 4953031 | PRJNA556992_P_NODE_122864_length_380_cov_8.921824_g120677_i0 | PRJNA556992 | 122864 | 380 | 8.921824 | 33.9029312 | Treponema | 157 | Bacteria | Bacteria | 93.5 | 2.13e-14 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g120677 | i0 | 88.608 | 5.2578947368421 | 79 | 5 | 20 | 4 | 226 | 302 | 1359371 | 1359295 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 1998 | 93.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 4955776 | 4955776 | PRJNA556992_P_NODE_843584_length_243_cov_6.735294_g841394_i0 | PRJNA556992 | 843584 | 243 | 6.735294 | 16.36676442 | Treponema | 157 | Bacteria | Bacteria | 405 | 1.46e-108 | NTclustered | gi|2265125022|gb|CP051194.1| | 1643512 | g841394 | i0 | 96.708 | 8.00411522633745 | 243 | 8 | 100 | 0 | 1 | 243 | 383654 | 383896 | Treponema sp. OMZ 855 chromosome, complete genome | blastn | 1945 | 405 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 855 | ||
| 7503276 | 7503276 | PRJNA556992_P_NODE_173946_length_342_cov_2.293680_g171758_i0 | PRJNA556992 | 173946 | 342 | 2.29368 | 7.8443856 | Treponema | 157 | Bacteria | Bacteria | 621 | 1.9599999999999997e-173 | NTclustered | gi|1996296230|gb|CP031393.1| | 58231 | g171758 | i0 | 99.415 | 195.093567251462 | 342 | 2 | 100 | 0 | 1 | 342 | 1679798 | 1679457 | Treponema medium strain ATCC 700293 chromosome, complete genome | blastn | 66722 | 621 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 8180487 | 8180487 | PRJNA556992_P_NODE_358467_length_281_cov_1.841346_g356278_i0 | PRJNA556992 | 358467 | 281 | 1.841346 | 5.17418226 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 281 | 3.04e-71 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g356278 | i0 | 87.603 | 3.29181494661922 | 242 | 30 | 86 | 0 | 3 | 244 | 2542627 | 2542868 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 925 | 281 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 9458267 | 9458267 | PRJNA556992_P_NODE_521528_length_265_cov_2.723958_g519339_i0 | PRJNA556992 | 521528 | 265 | 2.723958 | 7.2184887 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 331 | 2.78e-86 | NTclustered | gi|2621703426|emb|OY760686.1| | 2202144 | g519339 | i0 | 89.259 | 542.992452830189 | 270 | 21 | 99 | 7 | 1 | 264 | 5632 | 5365 | MAG: Spirochaetota bacterium isolate b615e79e-4617-45ea-95f9-f7a736470f88 genome assembly, chromosome: 1 | blastn | 143893 | 331 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 12006862 | 12006862 | PRJNA556992_P_NODE_377810_length_279_cov_1.470874_g375621_i0 | PRJNA556992 | 377810 | 279 | 1.470874 | 4.10373846 | Borreliella chilensis | 1245910 | Bacteria | Bacteria | 102 | 2.52e-17 | NTclustered | gi|741042522|gb|CP009910.1| | 1245910 | g375621 | i0 | 75.983 | 81.3082437275986 | 229 | 37 | 78 | 15 | 1 | 218 | 748451 | 748230 | Borreliella chilensis strain VA1 chromosome, complete genome | blastn | 22685 | 102 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella chilensis | ||
| 12011986 | 12011986 | PRJNA556992_P_NODE_787490_length_246_cov_4.710983_g785300_i0 | PRJNA556992 | 787490 | 246 | 4.710983 | 11.58901818 | Treponema saccharophilum | 165 | Bacteria | Bacteria | 189 | 1.62e-43 | NTclustered | gi|2581918939|dbj|AP025288.1| | 165 | g785300 | i0 | 80.567 | 1.00406504065041 | 247 | 46 | 100 | 2 | 1 | 246 | 361631 | 361876 | Treponema saccharophilum JCM 32279 DNA, complete genome | blastn | 247 | 189 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema saccharophilum | ||
| 12014579 | 12014579 | PRJNA556992_P_NODE_996970_length_231_cov_2.234177_g994780_i0 | PRJNA556992 | 996970 | 231 | 2.234177 | 5.16094887 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 270 | 5.2299999999999984e-68 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g994780 | i0 | 88.106 | 4.77922077922078 | 227 | 27 | 98 | 0 | 1 | 227 | 619907 | 619681 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 1104 | 270 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 13277940 | 13277940 | PRJNA556992_P_NODE_1168371_length_197_cov_6.991935_g1166180_i0 | PRJNA556992 | 1168371 | 197 | 6.991935 | 13.77411195 | Treponema sp. OMZ 305 | 1659192 | Bacteria | Bacteria | 359 | 8.98e-95 | NTclustered | gi|2265133351|gb|CP051300.1| | 1659192 | g1166180 | i0 | 99.492 | 5 | 197 | 1 | 100 | 0 | 1 | 197 | 2166466 | 2166662 | Treponema sp. OMZ 305 chromosome, complete genome | blastn | 985 | 359 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 305 | ||
| 13282701 | 13282701 | PRJNA556992_P_NODE_431551_length_273_cov_3.205000_g429362_i0 | PRJNA556992 | 431551 | 273 | 3.205 | 8.74965 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 433 | 7.66e-117 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g429362 | i0 | 95.238 | 1 | 273 | 13 | 100 | 0 | 1 | 273 | 197521 | 197793 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 273 | 433 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 14551698 | 14551698 | PRJNA556992_P_NODE_1071672_length_219_cov_6.547945_g1069481_i0 | PRJNA556992 | 1071672 | 219 | 6.547945 | 14.33999955 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 283 | 6.31e-72 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g1069481 | i0 | 90 | 34.0776255707763 | 220 | 20 | 100 | 2 | 1 | 219 | 1222273 | 1222055 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 7463 | 283 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 14560382 | 14560382 | PRJNA556992_P_NODE_655152_length_254_cov_3.392265_g652963_i0 | PRJNA556992 | 655152 | 254 | 3.392265 | 8.6163531 | Treponema parvum | 138851 | Bacteria | Bacteria | 222 | 1.66e-53 | NTclustered | gi|2023449428|gb|CP058315.1| | 138851 | g652963 | i0 | 85.185 | 2.91338582677165 | 216 | 32 | 100 | 0 | 1 | 216 | 1414540 | 1414325 | Treponema parvum strain OMZ 843 chromosome, complete genome | blastn | 740 | 222 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 15155746 | 15155746 | PRJNA556992_P_NODE_84632_length_427_cov_1.000000_g82451_i0 | PRJNA556992 | 84632 | 427 | 1 | 4.27 | Treponema | 157 | Bacteria | Bacteria | 584 | 3.2799999999999984e-162 | NTclustered | gi|1826584172|gb|MT257116.1| | 162155 | g82451 | i0 | 91.549 | 150.634660421546 | 426 | 33 | 99 | 3 | 1 | 425 | 39 | 462 | Uncultured Treponema sp. clone CH43 23S ribosomal RNA gene, partial sequence | blastn | 64321 | 584 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 15831978 | 15831978 | PRJNA556992_P_NODE_472693_length_269_cov_5.295918_g470504_i0 | PRJNA556992 | 472693 | 269 | 5.295918 | 14.24601942 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 337 | 6.069999999999998e-88 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g470504 | i0 | 89.219 | 1 | 269 | 29 | 100 | 0 | 1 | 269 | 73635 | 73367 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 269 | 337 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 15836801 | 15836801 | PRJNA556992_P_NODE_864733_length_242_cov_4.272189_g862543_i0 | PRJNA556992 | 864733 | 242 | 4.272189 | 10.33869738 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 348 | 2.48e-91 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g862543 | i0 | 92.562 | 1 | 242 | 18 | 100 | 0 | 1 | 242 | 444978 | 445219 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 242 | 348 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 16427766 | 16427766 | PRJNA556992_P_NODE_156373_length_353_cov_14.007143_g154185_i0 | PRJNA556992 | 156373 | 353 | 14.007143 | 49.44521479 | Spirochaetales | 136 | Bacteria | Bacteria | 65.8 | 4.29e-6 | NTclustered | gi|301633733|gb|CP002116.1| | 573413 | g154185 | i0 | 97.368 | 0.781869688385269 | 38 | 1 | 11 | 0 | 14 | 51 | 3611747 | 3611710 | Sediminispirochaeta smaragdinae DSM 11293 chromosome, complete genome | blastn | 276 | 65.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Sediminispirochaeta | Sediminispirochaeta smaragdinae | ||
| 17107418 | 17107418 | PRJNA556992_P_NODE_518054_length_265_cov_5.348958_g515865_i0 | PRJNA556992 | 518054 | 265 | 5.348958 | 14.1747387 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 346 | 9.92e-91 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g515865 | i0 | 90.189 | 2.98490566037736 | 265 | 26 | 100 | 0 | 1 | 265 | 773179 | 773443 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 791 | 346 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 17108043 | 17108043 | PRJNA556992_P_NODE_566094_length_261_cov_4.632979_g563905_i0 | PRJNA556992 | 566094 | 261 | 4.632979 | 12.09207519 | Treponema sp. OMZ 906 | 2563662 | Bacteria | Bacteria | 444 | 3.36e-120 | NTclustered | gi|2265130757|gb|CP051196.1| | 2563662 | g563905 | i0 | 97.318 | 9.96551724137931 | 261 | 7 | 100 | 0 | 1 | 261 | 1418123 | 1417863 | Treponema sp. OMZ 906 chromosome, complete genome | blastn | 2601 | 444 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 906 | ||
| 17108113 | 17108113 | PRJNA556992_P_NODE_572994_length_261_cov_1.888298_g570805_i0 | PRJNA556992 | 572994 | 261 | 1.888298 | 4.92845778 | Leptospira interrogans | 173 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|1914364548|gb|CP043876.1| | 90062 | g570805 | i0 | 94.286 | 0.134099616858238 | 35 | 1 | 13 | 1 | 211 | 245 | 3294912 | 3294945 | Leptospira interrogans serovar Icterohaemorrhagiae strain Langkawi chromosome 1, complete sequence | blastn | 35 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira interrogans | ||
| 17112526 | 17112526 | PRJNA556992_P_NODE_92594_length_415_cov_1.538012_g90410_i0 | PRJNA556992 | 92594 | 415 | 1.538012 | 6.3827498 | Treponema sp. | 166 | Bacteria | Bacteria | 462 | 1.56e-125 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g90410 | i0 | 87.136 | 193.325301204819 | 412 | 47 | 99 | 5 | 1 | 409 | 1476293 | 1475885 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 80230 | 462 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 17112946 | 17112946 | PRJNA556992_P_NODE_959154_length_234_cov_9.906832_g956964_i0 | PRJNA556992 | 959154 | 234 | 9.906832 | 23.18198688 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 377 | 3.04e-100 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g956964 | i0 | 95.726 | 1 | 234 | 10 | 100 | 0 | 1 | 234 | 2704474 | 2704707 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 234 | 377 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 17705276 | 17705276 | PRJNA556992_P_NODE_731974_length_249_cov_3.357955_g729785_i0 | PRJNA556992 | 731974 | 249 | 3.357955 | 8.36130795 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 141 | 4.68e-29 | NTclustered | gi|2891482181|emb|OZ219914.1| | 2053615 | g729785 | i0 | 92.784 | 26.3333333333333 | 97 | 7 | 39 | 0 | 135 | 231 | 1809743 | 1809839 | MAG: Spirochaetia bacterium isolate 65460407-d738-4661-97af-02a88c6845d9 genome assembly, chromosome: 2 | blastn | 6557 | 141 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 19653618 | 19653618 | PRJNA556992_P_NODE_326456_length_285_cov_1.688679_g324267_i0 | PRJNA556992 | 326456 | 285 | 1.688679 | 4.81273515 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 350 | 8.34e-92 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g324267 | i0 | 88.772 | 5.80350877192982 | 285 | 32 | 100 | 0 | 1 | 285 | 856557 | 856841 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 1654 | 350 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 19655139 | 19655139 | PRJNA556992_P_NODE_445996_length_272_cov_1.884422_g443807_i0 | PRJNA556992 | 445996 | 272 | 1.884422 | 5.12562784 | Borreliella sinica | 87162 | Bacteria | Bacteria | 76.8 | 1.48e-9 | NTclustered | gi|2624484891|gb|CP135180.1| | 87162 | g443807 | i0 | 97.727 | 15.7757352941176 | 44 | 1 | 16 | 0 | 223 | 266 | 416281 | 416238 | Borreliella sinica strain CMN3 chromosome, complete genome | blastn | 4291 | 76.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella sinica | ||
| 19655144 | 19655144 | PRJNA556992_P_NODE_446916_length_272_cov_1.547739_g444727_i0 | PRJNA556992 | 446916 | 272 | 1.547739 | 4.20985008 | Treponema vincentii | 69710 | Bacteria | Bacteria | 241 | 4.96e-59 | NTclustered | gi|2265115921|gb|CP051153.1| | 69710 | g444727 | i0 | 83.27 | 0.966911764705882 | 263 | 43 | 97 | 1 | 9 | 271 | 2016376 | 2016637 | Treponema vincentii strain OMZ 862 chromosome, complete genome | blastn | 263 | 241 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 19657570 | 19657570 | PRJNA556992_P_NODE_643556_length_255_cov_2.989011_g641367_i0 | PRJNA556992 | 643556 | 255 | 2.989011 | 7.62197805 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 303 | 5.79e-78 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g641367 | i0 | 88.71 | 0.972549019607843 | 248 | 28 | 97 | 0 | 3 | 250 | 2461634 | 2461881 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 248 | 303 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 19658271 | 19658271 | PRJNA556992_P_NODE_700976_length_251_cov_1.601124_g698787_i0 | PRJNA556992 | 700976 | 251 | 1.601124 | 4.01882124 | Treponema vincentii | 69710 | Bacteria | Bacteria | 459 | 1.1499999999999996e-124 | NTclustered | gi|2265113193|gb|CP051148.1| | 69710 | g698787 | i0 | 99.602 | 8.96812749003984 | 251 | 1 | 100 | 0 | 1 | 251 | 71290 | 71540 | Treponema vincentii strain OMZ 861 chromosome, complete genome | blastn | 2251 | 459 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 19661812 | 19661812 | PRJNA556992_P_NODE_985796_length_232_cov_2.591195_g983606_i0 | PRJNA556992 | 985796 | 232 | 2.591195 | 6.0115724 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 182 | 2.54e-41 | NTclustered | gi|2891482180|emb|OZ219913.1| | 2053615 | g983606 | i0 | 83.249 | 2.64224137931034 | 197 | 33 | 85 | 0 | 13 | 209 | 815920 | 815724 | MAG: Spirochaetia bacterium isolate 65460407-d738-4661-97af-02a88c6845d9 genome assembly, chromosome: 1 | blastn | 613 | 182 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 20251700 | 20251700 | PRJNA556992_P_NODE_173676_length_342_cov_3.022305_g171488_i0 | PRJNA556992 | 173676 | 342 | 3.022305 | 10.3362831 | root | 1 | Root_unresolved | Root_unresolved | 577 | 4.31e-160 | NTclustered | gi|1318779104|gb|CP019600.1| | 159 | g171488 | i0 | 95.954 | 127.122807017544 | 346 | 10 | 100 | 1 | 1 | 342 | 2037486 | 2037141 | Brachyspira hyodysenteriae strain BH718 chromosome, complete genome | blastn | 43476 | 577 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 20931626 | 20931626 | PRJNA556992_P_NODE_511397_length_266_cov_2.212435_g509208_i0 | PRJNA556992 | 511397 | 266 | 2.212435 | 5.8850771 | Treponema vincentii | 69710 | Bacteria | Bacteria | 307 | 4.7e-79 | NTclustered | gi|2265115921|gb|CP051153.1| | 69710 | g509208 | i0 | 87.547 | 23.3308270676692 | 265 | 33 | 99 | 0 | 1 | 265 | 2258004 | 2258268 | Treponema vincentii strain OMZ 862 chromosome, complete genome | blastn | 6206 | 307 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 20932261 | 20932261 | PRJNA556992_P_NODE_561957_length_262_cov_1.619048_g559768_i0 | PRJNA556992 | 561957 | 262 | 1.619048 | 4.24190576 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 285 | 2.1699999999999997e-72 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g559768 | i0 | 93.264 | 1.01145038167939 | 193 | 13 | 100 | 0 | 70 | 262 | 878194 | 878386 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 265 | 285 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 20933283 | 20933283 | PRJNA556992_P_NODE_64597_length_467_cov_1.512690_g62425_i0 | PRJNA556992 | 64597 | 467 | 1.51269 | 7.0642623 | Treponema vincentii | 69710 | Bacteria | Bacteria | 811 | 0 | NTclustered | gi|2265115921|gb|CP051153.1| | 69710 | g62425 | i0 | 98.073 | 192.107066381156 | 467 | 7 | 100 | 2 | 1 | 467 | 351909 | 351445 | Treponema vincentii strain OMZ 862 chromosome, complete genome | blastn | 89714 | 811 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 22801735 | 22801735 | PRJNA556992_P_NODE_1109158_length_210_cov_7.978102_g1106967_i0 | PRJNA556992 | 1109158 | 210 | 7.978102 | 16.7540142 | Treponema | 157 | Bacteria | Bacteria | 372 | 1.25e-98 | NTclustered | gi|1996296230|gb|CP031393.1| | 58231 | g1106967 | i0 | 98.571 | 13 | 210 | 3 | 100 | 0 | 1 | 210 | 336510 | 336301 | Treponema medium strain ATCC 700293 chromosome, complete genome | blastn | 2730 | 372 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 23479044 | 23479044 | PRJNA556992_P_NODE_286199_length_291_cov_2.683486_g284010_i0 | PRJNA556992 | 286199 | 291 | 2.683486 | 7.80894426 | Treponema medium | 58231 | Bacteria | Bacteria | 257 | 5.32e-64 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g284010 | i0 | 83.039 | 1.94501718213058 | 283 | 48 | 97 | 0 | 5 | 287 | 30387 | 30105 | Treponema medium strain T19 chromosome, complete genome | blastn | 566 | 257 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 23480195 | 23480195 | PRJNA556992_P_NODE_368419_length_280_cov_1.487923_g366230_i0 | PRJNA556992 | 368419 | 280 | 1.487923 | 4.1661844 | Treponema sp. | 166 | Bacteria | Bacteria | 394 | 3.72e-105 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g366230 | i0 | 92.171 | 170.517857142857 | 281 | 19 | 100 | 3 | 1 | 280 | 1474670 | 1474948 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 47745 | 394 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 23482944 | 23482944 | PRJNA556992_P_NODE_589799_length_259_cov_6.752688_g587610_i0 | PRJNA556992 | 589799 | 259 | 6.752688 | 17.48946192 | Treponema sp. OMZ 857 | 1643513 | Bacteria | Bacteria | 457 | 4.279999999999999e-124 | NTclustered | gi|2265110357|gb|CP051147.1| | 1643513 | g587610 | i0 | 98.456 | 10 | 259 | 4 | 100 | 0 | 1 | 259 | 313214 | 312956 | Treponema sp. OMZ 857 chromosome, complete genome | blastn | 2590 | 457 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 857 | ||
| 24077623 | 24077623 | PRJNA556992_P_NODE_290559_length_290_cov_2.410138_g288370_i0 | PRJNA556992 | 290559 | 290 | 2.410138 | 6.9894002 | Treponema | 157 | Bacteria | Bacteria | 466 | 8.09e-127 | NTclustered | gi|2265172126|gb|CP051522.1| | 158 | g288370 | i0 | 95.833 | 24.9275862068966 | 288 | 12 | 99 | 0 | 3 | 290 | 1190733 | 1191020 | Treponema denticola strain OMZ 910 chromosome, complete genome | blastn | 7229 | 466 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 24748628 | 24748628 | PRJNA556992_P_NODE_1054980_length_223_cov_7.180000_g1052790_i0 | PRJNA556992 | 1054980 | 223 | 7.18 | 16.0114 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 195 | 3.11e-45 | NTclustered | gi|2777199279|gb|CP162140.1| | 3235172 | g1052790 | i0 | 88.344 | 2.43497757847534 | 163 | 18 | 73 | 1 | 1 | 162 | 157268 | 157106 | Leptospira mgodei strain WS4.C2 chromosome 2, complete sequence | blastn | 543 | 195 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 25353768 | 25353768 | PRJNA556992_P_NODE_776840_length_247_cov_1.764368_g774650_i0 | PRJNA556992 | 776840 | 247 | 1.764368 | 4.35798896 | Turneriella | 338321 | Bacteria | Bacteria | 427 | 3.17e-115 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g774650 | i0 | 97.967 | 467.19028340081 | 246 | 5 | 99 | 0 | 1 | 246 | 1044 | 799 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 115396 | 427 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 25353782 | 25353782 | PRJNA556992_P_NODE_782100_length_247_cov_0.885057_g779910_i0 | PRJNA556992 | 782100 | 247 | 0.885057 | 2.18609079 | Treponema | 157 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2265163189|gb|CP051302.1| | 158 | g779910 | i0 | 100 | 11 | 247 | 0 | 100 | 0 | 1 | 247 | 1631356 | 1631602 | Treponema denticola strain OMZ 853 chromosome, complete genome | blastn | 2717 | 457 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;