RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6901540 6901540 PRJNA556992_P_NODE_1142426_length_203_cov_5.153846_g1140235_i0 PRJNA556992 1142426 203 5.153846 10.46230738 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.001   NTclustered gi|2794976197|ref|XM_067867937.1| 2049356 g1140235 i0 100 0.295566502463054 30 0 15 0 106 135 415 386 Monocercomonoides exilis uncharacterized protein (MONOS_15084), partial mRNA blastn 60 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
8779977 8779977 PRJNA556992_P_NODE_667367_length_253_cov_3.616667_g665178_i0 PRJNA556992 667367 253 3.616667 9.15016751 Monocercomonoides 302781 Preaxostyla other_Eukaryota 285 2.08e-72   NTclustered gi|156708125|gb|EF474120.1| 302782 g665178 i0 89.177 85.498023715415 231 22 91 3 25 253 1271 1042 Monocercomonoides sp. PA clone 1/4 tubulin alpha subunit mRNA, complete cds blastn 21631 285 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides sp. PA
9460629 9460629 PRJNA556992_P_NODE_715728_length_250_cov_2.457627_g713539_i0 PRJNA556992 715728 250 2.457627 6.1440675 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.023   NTclustered gi|2794957498|ref|XM_067874386.1| 2049356 g713539 i0 100 0.112 28 0 11 0 12 39 2899 2926 Monocercomonoides exilis uncharacterized protein (MONOS_4321), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
15829908 15829908 PRJNA556992_P_NODE_31573_length_616_cov_14.141805_g29465_i0 PRJNA556992 31573 616 14.141805 87.1135188 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 63.9 2.82e-5   NTclustered gi|2794954125|ref|XM_067876446.1| 2049356 g29465 i0 91.489 1.79058441558442 47 2 7 2 76 121 2143 2098 Monocercomonoides exilis putative N-terminal C2 containing protein (MONOS_623), mRNA blastn 1103 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;