RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA556992 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4353368 4353368 PRJNA556992_P_NODE_252704_length_304_cov_1.000000_g250515_i0 PRJNA556992 252704 304 1 3.04 Simplexvirus humanalpha1 3050292 Viruses Viruses 551 2.289999999999999e-152   NTclustered gi|2549842301|gb|OQ724955.1| 10298 g250515 i0 99.342 100 304 2 100 0 1 304 110899 111202 Human alphaherpesvirus 1 strain CJ462, partial genome blastn 30400 551 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
4952566 4952566 PRJNA556992_P_NODE_1066604_length_220_cov_10.156463_g1064413_i0 PRJNA556992 1066604 220 10.156463 22.3442186 root 1 Root_unresolved Root_unresolved 396 7.809999999999997e-106   NTclustered gi|2583941926|gb|OP431890.1| 10298 g1064413 i0 99.091 100.004545454545 220 2 100 0 1 220 98583 98802 Human alphaherpesvirus 1 strain HSV1-v63_d84_oral, partial genome blastn 22001 396 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
11330255 11330255 PRJNA556992_P_NODE_678949_length_252_cov_4.301676_g676760_i0 PRJNA556992 678949 252 4.301676 10.84022352 root 1 Root_unresolved Root_unresolved 466 6.89e-127   NTclustered gi|2583942922|gb|OP431909.1| 10298 g676760 i0 100 100 252 0 100 0 1 252 138411 138160 Human alphaherpesvirus 1 strain HSV1-v62_d3_gen_les, partial genome blastn 25200 466 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
11330505 11330505 PRJNA556992_P_NODE_747249_length_249_cov_0.875000_g745060_i0 PRJNA556992 747249 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 460 3.16e-125   NTclustered gi|1407524929|gb|MG999880.1| 10298 g745060 i0 100 186.044176706827 249 0 100 0 1 249 118532 118780 Human alphaherpesvirus 1 strain 2007-16426, partial genome blastn 46325 460 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
20254035 20254035 PRJNA556992_P_NODE_803396_length_246_cov_0.890173_g801206_i0 PRJNA556992 803396 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|2228073964|gb|ON007148.1| 10298 g801206 i0 100 100 246 0 100 0 1 246 103277 103032 Human alphaherpesvirus 1 strain v43_d349_gen, partial genome blastn 24600 455 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
20254174 20254174 PRJNA556992_P_NODE_839216_length_244_cov_0.900585_g837026_i0 PRJNA556992 839216 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 451 1.86e-122   NTclustered gi|1407524929|gb|MG999880.1| 10298 g837026 i0 100 100 244 0 100 0 1 244 61625 61382 Human alphaherpesvirus 1 strain 2007-16426, partial genome blastn 24400 451 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;