RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
532499 532499 PRJNA556992_P_NODE_745821_length_249_cov_0.875000_g743632_i0 PRJNA556992 745821 249 0.875 2.17875 Phycomyces blakesleeanus 4837 Fungi Fungi 165 2.77e-36   NTclustered gi|1069950109|ref|XM_018427760.1| 763407 g743632 i0 84.181 3.71887550200803 177 21 70 4 74 248 1 172 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 926 165 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
3074493 3074493 PRJNA556992_P_NODE_1145123_length_202_cov_7.868217_g1142932_i0 PRJNA556992 1145123 202 7.868217 15.89379834 Rhizopus delemar 936053 Fungi Fungi 58.4 3.78e-4   NTclustered gi|2797474128|ref|XM_067666230.1| 246409 g1142932 i0 94.595 0.183168316831683 37 2 18 0 148 184 556 520 Rhizopus delemar RA 99-880 uncharacterized protein (RO3G_11646), partial mRNA blastn 37 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
4361487 4361487 PRJNA556992_P_NODE_875784_length_242_cov_1.366864_g873594_i0 PRJNA556992 875784 242 1.366864 3.30781088 Zychaea mexicana 64656 Fungi Fungi 102 2.13e-17   NTclustered gi|2432198042|ref|XM_053125913.1| 64656 g873594 i0 87.64 2.54545454545455 89 9 36 2 145 232 396 309 Zychaea mexicana 40S ribosomal protein S22-A (BDB00DRAFT_859314), partial mRNA blastn 616 102 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
4952892 4952892 PRJNA556992_P_NODE_1150844_length_201_cov_5.843750_g1148653_i0 PRJNA556992 1150844 201 5.84375 11.7459375 Fungi 4751 Fungi Fungi 322 1.21e-83   NTclustered gi|658131632|emb|HF968958.1| 4874 g1148653 i0 95.522 144.318407960199 201 9 100 0 1 201 2197 1997 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 29008 322 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
5637734 5637734 PRJNA556992_P_NODE_85225_length_426_cov_1.192635_g83044_i0 PRJNA556992 85225 426 1.192635 5.0806251 Lobosporangium transversale 64571 Fungi Fungi 161 6.54e-35   NTclustered gi|1227147748|ref|XM_022025650.1| 64571 g83044 i0 83.929 12.7816901408451 168 27 39 0 6 173 876 1043 Lobosporangium transversale hypothetical protein (BCR41DRAFT_361974), mRNA blastn 5445 161 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
6229494 6229494 PRJNA556992_P_NODE_302005_length_288_cov_3.809302_g299816_i0 PRJNA556992 302005 288 3.809302 10.97078976 Eukaryota 2759 Fungi Fungi 532 7.8e-147   NTclustered gi|1272210360|gb|KY780631.1| 4846 g299816 i0 100 99.9895833333333 288 0 100 0 1 288 852 1139 Rhizopus stolonifer strain cy3 18S ribosomal RNA gene, partial sequence blastn 28797 532 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
9463324 9463324 PRJNA556992_P_NODE_921928_length_238_cov_5.127273_g919738_i0 PRJNA556992 921928 238 5.127273 12.20290974 Rhizopus microsporus 58291 Fungi Fungi 287 5.38e-73   NTclustered gi|1331199277|ref|XM_023608914.1| 1340429 g919738 i0 96.532 0.726890756302521 173 6 73 0 66 238 562 390 Rhizopus microsporus ATCC 52813 Mgm101p-domain-containing protein (RHIMIDRAFT_238220), partial mRNA blastn 173 287 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
9463702 9463702 PRJNA556992_P_NODE_954588_length_235_cov_3.185185_g952398_i0 PRJNA556992 954588 235 3.185185 7.48518475 Mucor velutinosus 708070 Fungi Fungi 145 3.38e-30   NTclustered gi|2724944331|ref|XM_064832498.1| 708070 g952398 i0 90.741 0.459574468085106 108 10 46 0 128 235 1363 1470 Mucor velutinosus uncharacterized protein (ATC70_013334), partial mRNA blastn 108 145 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
10055405 10055405 PRJNA556992_P_NODE_623948_length_257_cov_1.657609_g621759_i0 PRJNA556992 623948 257 1.657609 4.26005513 Mortierellaceae 4854 Fungi Fungi 466 7.05e-127   NTclustered gi|973446302|gb|KP744392.1| 64518 g621759 i0 99.608 99.2607003891051 255 1 99 0 1 255 358 612 Mortierella alpina strain ANSA9 28S ribosomal RNA gene, partial sequence blastn 25510 466 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella alpina
10733920 10733920 PRJNA556992_P_NODE_520149_length_265_cov_3.281250_g517960_i0 PRJNA556992 520149 265 3.28125 8.6953125 Rhizophagus irregularis 588596 Fungi Fungi 446 9.51e-121   NTclustered gi|2749793101|ref|XM_025315673.2| 588596 g517960 i0 96.981 1 265 8 100 0 1 265 1010 746 Rhizophagus irregularis uncharacterized protein (OCT59_029612), partial mRNA blastn 265 446 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
10735790 10735790 PRJNA556992_P_NODE_675989_length_253_cov_1.361111_g673800_i0 PRJNA556992 675989 253 1.361111 3.44361083 Rhizophagus irregularis 588596 Fungi Fungi 324 4.41e-84   NTclustered gi|2749816030|ref|XM_025329705.2| 588596 g673800 i0 89.764 1.00395256916996 254 24 100 2 1 253 171 423 Rhizophagus irregularis uncharacterized protein (OCT59_015400), partial mRNA blastn 254 324 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
12605770 12605770 PRJNA556992_P_NODE_582290_length_260_cov_2.593583_g580101_i0 PRJNA556992 582290 260 2.593583 6.7433158 Eukaryota 2759 Fungi Fungi 54.7 0.007   NTclustered gi|2323713889|ref|XM_051547873.1| 101107 g580101 i0 100 0.223076923076923 29 0 11 0 182 210 162 190 Halteromyces radiatus uncharacterized protein (BX664DRAFT_356285), partial mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
13288521 13288521 PRJNA556992_P_NODE_89751_length_419_cov_1.462428_g87568_i0 PRJNA556992 89751 419 1.462428 6.12757332 Rhizopus stolonifer 4846 Fungi Fungi 773 0   NTclustered gi|82398553|gb|DQ273817.1| 4846 g87568 i0 100 100.169451073986 418 0 99 0 1 418 2507 2924 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 41971 773 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
14564334 14564334 PRJNA556992_P_NODE_974552_length_233_cov_3.031250_g972362_i0 PRJNA556992 974552 233 3.03125 7.0628125 Mucor velutinosus 708070 Fungi Fungi 52.8 0.021   NTclustered gi|2724924559|ref|XM_064830808.1| 708070 g972362 i0 100 0.120171673819742 28 0 12 0 101 128 411 438 Mucor velutinosus eukaryotic translation initiation factor 3 subunit E (INT6), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
15834874 15834874 PRJNA556992_P_NODE_709993_length_250_cov_5.378531_g707804_i0 PRJNA556992 709993 250 5.378531 13.4463275 Phycomyces blakesleeanus 4837 Fungi Fungi 52.8 0.023   NTclustered gi|1069945958|ref|XM_018435206.1| 763407 g707804 i0 100 0.112 28 0 11 0 3 30 894 867 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
17703651 17703651 PRJNA556992_P_NODE_287634_length_291_cov_1.802752_g285445_i0 PRJNA556992 287634 291 1.802752 5.24600832 Eukaryota 2759 Fungi Fungi 58.4 5.79e-4   NTclustered gi|2837728524|ref|XM_069387903.1| 4840 g285445 i0 89.13 11.0549828178694 46 5 16 0 84 129 402 357 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_8748), partial mRNA blastn 3217 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
18977135 18977135 PRJNA556992_P_NODE_301155_length_288_cov_45.632558_g298966_i0 PRJNA556992 301155 288 45.632558 131.42176704 Fungi 4751 Fungi Fungi 392 1.3799999999999999e-104   NTclustered gi|658131632|emb|HF968958.1| 4874 g298966 i0 91.319 98.2465277777778 288 23 99 2 1 287 1974 2260 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 28295 392 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
18978575 18978575 PRJNA556992_P_NODE_715015_length_250_cov_2.610169_g712826_i0 PRJNA556992 715015 250 2.610169 6.5254225 Mucoromycota 1913637 Fungi Fungi 462 8.83e-126   NTclustered gi|11078061|gb|AF157174.1|AF157174 29923 g712826 i0 100 100 250 0 100 0 1 250 551 302 Amylomyces rouxii 28S ribosomal RNA gene, partial sequence blastn 25000 462 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Amylomyces Amylomyces rouxii
19654689 19654689 PRJNA556992_P_NODE_408596_length_276_cov_1.147783_g406407_i0 PRJNA556992 408596 276 1.147783 3.16788108 Mucor velutinosus 708070 Fungi Fungi 58.4 5.45e-4   NTclustered gi|2724924811|ref|XM_064830848.1| 708070 g406407 i0 100 2.14855072463768 31 0 11 0 243 273 911 941 Mucor velutinosus Malic enzyme (ATC70_011662), partial mRNA blastn 593 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
24079626 24079626 PRJNA556992_P_NODE_851439_length_243_cov_2.264706_g849249_i0 PRJNA556992 851439 243 2.264706 5.50323558 Fungi 4751 Fungi Fungi 449 6.65e-122   NTclustered gi|1493534650|gb|MK070014.1| 4846 g849249 i0 100 92.8518518518518 243 0 100 0 1 243 702 460 Rhizopus stolonifer strain M7RJF large subunit ribosomal RNA gene, partial sequence blastn 22563 449 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
24759428 24759428 PRJNA556992_P_NODE_800140_length_246_cov_0.890173_g797950_i0 PRJNA556992 800140 246 0.890173 2.18982558 Mortierella sp. 1715235 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|2313178125|gb|OP581437.1| 1715235 g797950 i0 100 93.3170731707317 246 0 100 0 1 246 676 431 Mortierella sp. isolate S12 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22956 455 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;