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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1808788 1808788 PRJNA556992_P_NODE_796582_length_246_cov_1.716763_g794392_i0 PRJNA556992 796582 246 1.716763 4.22323698 Chytridiomycota sp. 2012212 Fungi Fungi 361 3.25e-95   NTclustered gi|1832315394|gb|MT353599.1| 2012212 g794392 i0 98.537 73.390243902439 205 2 83 1 23 226 1 205 Chytridiomycota sp. isolate F_OTU_414 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 18054 361 1 Eukaryota Opisthokonta Fungi Chytridiomycota         Chytridiomycota sp.
9458261 9458261 PRJNA556992_P_NODE_521208_length_265_cov_2.822917_g519019_i0 PRJNA556992 521208 265 2.822917 7.48073005 Spizellomyces punctatus 109760 Fungi Fungi 161 3.86e-35   NTclustered gi|1026959854|ref|XM_016750634.1| 645134 g519019 i0 95.098 38.3698113207547 102 5 38 0 151 252 207 308 Spizellomyces punctatus DAOM BR117 histone H2B (SPPG_02345), mRNA blastn 10168 161 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
12004082 12004082 PRJNA556992_P_NODE_188950_length_333_cov_2.942308_g186762_i0 PRJNA556992 188950 333 2.942308 9.79788564 Spizellomyces punctatus 109760 Fungi Fungi 316 1.0099999999999999e-81   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g186762 i0 93.458 53.6636636636637 214 13 64 1 121 333 4085 3872 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 17870 316 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
15155356 15155356 PRJNA556992_P_NODE_739312_length_249_cov_1.647727_g737123_i0 PRJNA556992 739312 249 1.647727 4.10284023 Chytridiomycetes 451435 Fungi Fungi 429 8.91e-116   NTclustered gi|1866582754|gb|MT730929.1| 64517 g737123 i0 97.976 99.2008032128514 247 5 99 0 1 247 379 133 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24701 429 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
19661094 19661094 PRJNA556992_P_NODE_923076_length_238_cov_4.218182_g920886_i0 PRJNA556992 923076 238 4.218182 10.03927316 Spizellomyces punctatus 109760 Fungi Fungi 54.7 0.006   NTclustered gi|1026950408|ref|XM_016749068.1| 645134 g920886 i0 100 0.121848739495798 29 0 12 0 69 97 4119 4147 Spizellomyces punctatus DAOM BR117 cytoskeletal protein-binding protein SLA1 (SPPG_00739), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
19661165 19661165 PRJNA556992_P_NODE_92896_length_414_cov_3.803519_g90712_i0 PRJNA556992 92896 414 3.803519 15.74656866 Chytriomyces hyalinus 4814 Fungi Fungi 268 3.6299999999999996e-67   NTclustered gi|189909135|gb|DQ273836.2| 4814 g90712 i0 78.708 104.859903381643 418 77 100 11 1 414 2867 2458 Chytriomyces hyalinus isolate AFTOL-ID 1537 28S ribosomal RNA gene, partial sequence blastn 43412 268 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
22207061 22207061 PRJNA556992_P_NODE_534278_length_264_cov_2.418848_g532089_i0 PRJNA556992 534278 264 2.418848 6.38575872 Gromochytrium mamkaevae 1486924 Fungi Fungi 73.1 1.85e-8   NTclustered gi|612507318|gb|KF586842.1| 1486924 g532089 i0 100 3.17424242424242 39 0 15 0 1 39 6169 6131 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 838 73.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
22211164 22211164 PRJNA556992_P_NODE_865878_length_242_cov_3.668639_g863688_i0 PRJNA556992 865878 242 3.668639 8.87810638 Polychytrium aggregatum 110093 Fungi Fungi 67.6 7.78e-7   NTclustered gi|2432159932|ref|XM_053115047.1| 110093 g863688 i0 100 0.590909090909091 36 0 15 0 173 208 634 599 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_600912), mRNA blastn 143 67.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23480285 23480285 PRJNA556992_P_NODE_375099_length_279_cov_2.135922_g372910_i0 PRJNA556992 375099 279 2.135922 5.95922238 Polychytrium aggregatum 110093 Fungi Fungi 265 3.03e-66   NTclustered gi|2432131711|ref|XM_053109357.1| 110093 g372910 i0 89.474 65.3476702508961 209 22 75 0 12 220 334 126 Polychytrium aggregatum calmodulin (BJ171DRAFT_488251), mRNA blastn 18232 265 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;