contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Chlorobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1802274 | 1802274 | PRJNA556992_P_NODE_281522_length_292_cov_3.703196_g279333_i0 | PRJNA556992 | 281522 | 292 | 3.703196 | 10.81333232 | Chlorobaculum tepidum | 1097 | Bacteria | Bacteria | 224 | 5.42e-54 | NTclustered | gi|21672293|gb|AE006470.1| | 194439 | g279333 | i0 | 82.308 | 57.6095890410959 | 260 | 44 | 89 | 2 | 31 | 289 | 862842 | 863100 | Chlorobium tepidum TLS, complete genome | blastn | 16822 | 224 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobaculum | Chlorobaculum tepidum | |
| 2402291 | 2402291 | PRJNA556992_P_NODE_615302_length_257_cov_5.250000_g613113_i0 | PRJNA556992 | 615302 | 257 | 5.25 | 13.4925 | FCB group | 1783270 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1187407156|gb|CP020873.1| | 1974213 | g613113 | i0 | 100 | 0.217898832684825 | 28 | 0 | 11 | 0 | 117 | 144 | 1887450 | 1887423 | Prosthecochloris sp. HL-130-GSB chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Prosthecochloris | Prosthecochloris sp. HL-130-GSB | |
| 17104826 | 17104826 | PRJNA556992_P_NODE_31674_length_616_cov_1.930018_g29565_i0 | PRJNA556992 | 31674 | 616 | 1.930018 | 11.88891088 | uncultured Chlorobiota bacterium | 156405 | Bacteria | Bacteria | 872 | 0 | NTclustered | gi|77403655|dbj|AB161089.1| | 156405 | g29565 | i0 | 98.196 | 92.8344155844156 | 499 | 9 | 81 | 0 | 2 | 500 | 499 | 1 | Uncultured Chlorobi bacterium gene for 16S ribosomal RNA, partial sequence, clone:3D9 | blastn | 57186 | 872 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | uncultured Chlorobiota bacterium | |||||
| 20928334 | 20928334 | PRJNA556992_P_NODE_259837_length_300_cov_6.682819_g257648_i0 | PRJNA556992 | 259837 | 300 | 6.682819 | 20.048457 | Prosthecochloris sp. GSB1 | 281093 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1227310175|gb|CP022571.1| | 281093 | g257648 | i0 | 100 | 0.1 | 30 | 0 | 10 | 0 | 223 | 252 | 2401761 | 2401732 | Prosthecochloris sp. GSB1 strain TY Vent = GSB1 = Ty-1 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Prosthecochloris | Prosthecochloris sp. GSB1 | |
| 22805127 | 22805127 | PRJNA556992_P_NODE_915618_length_239_cov_3.234940_g913428_i0 | PRJNA556992 | 915618 | 239 | 3.23494 | 7.7315066 | Chlorobiaceae | 191412 | Bacteria | Bacteria | 442 | 1.0899999999999994e-119 | NTclustered | gi|470483299|ref|NR_076584.1| | 1092 | g913428 | i0 | 100 | 154.384937238494 | 239 | 0 | 100 | 0 | 1 | 239 | 705 | 943 | Chlorobium limicola strain DSM 245 23S ribosomal RNA gene, complete sequence | blastn | 36898 | 442 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobium | Chlorobium limicola |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;