RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4357586 4357586 PRJNA556992_P_NODE_564984_length_261_cov_8.218085_g562795_i0 PRJNA556992 564984 261 8.218085 21.44920185 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 230 1.0199999999999998e-55   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g562795 i0 83.465 5.50574712643678 254 35 96 7 1 251 126047 125798 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 1437 230 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
6900387 6900387 PRJNA556992_P_NODE_1057006_length_223_cov_4.653333_g1054816_i0 PRJNA556992 1057006 223 4.653333 10.37693259 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 183 6.73e-42   NTclustered gi|2258865392|gb|CP060227.1| 2052152 g1054816 i0 82.273 110.493273542601 220 31 96 6 7 220 432071 432288 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-22 chromosome, complete genome blastn 24640 183 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
12001650 12001650 PRJNA556992_P_NODE_1077430_length_218_cov_4.779310_g1075239_i0 PRJNA556992 1077430 218 4.77931 10.4188958 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 224 3.859999999999999e-54   NTclustered gi|2258827791|gb|CP060222.1| 2052152 g1075239 i0 85.455 1.13761467889908 220 27 100 4 1 218 1008259 1008475 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-2 chromosome blastn 248 224 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
15835891 15835891 PRJNA556992_P_NODE_79213_length_436_cov_1.608815_g77032_i0 PRJNA556992 79213 436 1.608815 7.0144334 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 259 2.31e-64   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g77032 i0 84.328 7.72247706422018 268 39 61 3 8 273 126002 125736 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 3367 259 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
19654181 19654181 PRJNA556992_P_NODE_366256_length_280_cov_2.082126_g364067_i0 PRJNA556992 366256 280 2.082126 5.8299528 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 154 6.88e-33   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g364067 i0 79.73 3.63571428571429 222 37 78 8 63 280 125738 125955 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 1018 154 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
20927922 20927922 PRJNA556992_P_NODE_232997_length_310_cov_4.400844_g230809_i0 PRJNA556992 232997 310 4.400844 13.6426164 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 113 1.31e-20   NTclustered gi|2258874820|gb|CP060231.1| 2052152 g230809 i0 100 0.196774193548387 61 0 20 0 250 310 669865 669925 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-36 chromosome blastn 61 113 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
24748060 24748060 PRJNA556992_P_NODE_1003920_length_230_cov_2.929936_g1001730_i0 PRJNA556992 1003920 230 2.929936 6.7388528 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 147 9.16e-31   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g1001730 i0 83.23 0.7 161 26 70 1 1 161 583828 583669 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 161 147 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;