RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4952543 4952543 PRJNA556992_P_NODE_1061704_length_222_cov_4.234899_g1059514_i0 PRJNA556992 1061704 222 4.234899 9.40147578 Bacteria 2 Bacteria Bacteria 102 1.93e-17   NTclustered gi|2531976039|emb|OY282377.1| 199737 g1059514 i0 88.372 29.7927927927928 86 8 38 2 18 102 5053404 5053488 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 6614 102 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
6901223 6901223 PRJNA556992_P_NODE_1117366_length_208_cov_13.666667_g1115175_i0 PRJNA556992 1117366 208 13.666667 28.42666736 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 67.6 6.51e-7   NTclustered gi|2108289157|gb|CP070677.1| 2053570 g1115175 i0 81.609 2.85096153846154 87 10 39 5 86 167 2842458 2842543 MAG: Candidatus Latescibacterota bacterium isolate bin70 chromosome blastn 593 67.6 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
10056048 10056048 PRJNA556992_P_NODE_798088_length_246_cov_1.485549_g795898_i0 PRJNA556992 798088 246 1.485549 3.65445054 FCB group 1783270 Bacteria Bacteria 65.8 2.85e-6   NTclustered gi|2531976039|emb|OY282377.1| 199737 g795898 i0 100 35.1341463414634 35 0 14 0 1 35 3966009 3965975 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 8643 65.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;