RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Kaiseribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4351672 4351672 PRJNA556992_P_NODE_146184_length_361_cov_2.097222_g143996_i0 PRJNA556992 146184 361 2.097222 7.57097142 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 285 3.1e-72   NTclustered gi|2874253687|emb|OY969413.1| 2030810 g143996 i0 81.25 27.8531855955679 368 56 100 12 1 361 887026 887387 MAG: Candidatus Kaiserbacteria bacterium isolate MFD01223.bin.1.23 genome assembly, chromosome: 1 blastn 10055 285 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
12010512 12010512 PRJNA556992_P_NODE_6730_length_1256_cov_3.872358_g5635_i0 PRJNA556992 6730 1256 3.872358 48.63681648 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 1267 0   NTclustered gi|2874253687|emb|OY969413.1| 2030810 g5635 i0 85.098 102.946656050955 1275 153 99 31 1 1255 887554 886297 MAG: Candidatus Kaiserbacteria bacterium isolate MFD01223.bin.1.23 genome assembly, chromosome: 1 blastn 129301 1267 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
18373994 18373994 PRJNA556992_P_NODE_1037775_length_226_cov_5.705882_g1035585_i0 PRJNA556992 1037775 226 5.705882 12.89529332 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 309 1.08e-79   NTclustered gi|2874253687|emb|OY969413.1| 2030810 g1035585 i0 92.925 13.7345132743363 212 15 94 0 1 212 888988 888777 MAG: Candidatus Kaiserbacteria bacterium isolate MFD01223.bin.1.23 genome assembly, chromosome: 1 blastn 3104 309 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;