RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8187601 8187601 PRJNA556992_P_NODE_919687_length_239_cov_2.156627_g917497_i0 PRJNA556992 919687 239 2.156627 5.15433853 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 342 1.1399999999999999e-89   NTclustered gi|2575803556|emb|OY729432.1| 2838779 g917497 i0 92.469 161.744769874477 239 18 100 0 1 239 2239048 2239286 MAG: Candidatus Binatia bacterium isolate b65fbbe8-1638-4b94-9072-1473f084fbf4 genome assembly, chromosome: 1 blastn 38657 342 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
13276812 13276812 PRJNA556992_P_NODE_1076871_length_218_cov_5.248276_g1074680_i0 PRJNA556992 1076871 218 5.248276 11.44124168 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 84.2 6.83e-12   NTclustered gi|2893356064|emb|OZ220487.1| 3036252 g1074680 i0 83.333 4.20183486238532 90 15 41 0 7 96 579302 579213 MAG: uncultured Candidatus Binatia bacterium isolate d2d8104a-f810-4fb4-bb0c-dc82b69497ba genome assembly, chromosome: 1 blastn 916 84.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
18385803 18385803 PRJNA556992_P_NODE_855555_length_243_cov_1.476471_g853365_i0 PRJNA556992 855555 243 1.476471 3.58782453 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 52.8 0.022   NTclustered gi|2531949172|emb|OY282457.1| 3036252 g853365 i0 100 0.11522633744856 28 0 12 0 32 59 3771215 3771188 MAG: uncultured Candidatus Binatia bacterium genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
19652968 19652968 PRJNA556992_P_NODE_28196_length_647_cov_5.287456_g26120_i0 PRJNA556992 28196 647 5.287456 34.20984032 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 427 9.15e-115   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g26120 i0 80.102 145.370942812983 588 105 90 10 10 592 3394739 3394159 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 94055 427 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;