contig_metadata
26 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_phylum = "Armatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1801826 | 1801826 | PRJNA556992_P_NODE_252482_length_304_cov_1.333333_g250293_i0 | PRJNA556992 | 252482 | 304 | 1.333333 | 4.05333232 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 291 | 5.51e-74 | NTclustered | gi|2621703062|emb|OY760504.1| | 2033014 | g250293 | i0 | 84.466 | 127.990131578947 | 309 | 32 | 99 | 12 | 4 | 304 | 2411332 | 2411032 | MAG: Armatimonadota bacterium isolate be0b92b7-bbec-405b-9e81-a5dbe9f1ff7a genome assembly, chromosome: 1 | blastn | 38909 | 291 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 1802694 | 1802694 | PRJNA556992_P_NODE_308882_length_287_cov_3.696262_g306693_i0 | PRJNA556992 | 308882 | 287 | 3.696262 | 10.60827194 | Chthonomonadaceae bacterium | 2739509 | Bacteria | Bacteria | 252 | 2.44e-62 | NTclustered | gi|1938770100|gb|CP054189.1| | 2739509 | g306693 | i0 | 86.325 | 215.620209059233 | 234 | 29 | 81 | 3 | 56 | 287 | 126393 | 126625 | MAG: Chthonomonadaceae bacterium isolate H1_ARM1 chromosome, complete genome | blastn | 61883 | 252 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonadaceae bacterium | |||
| 3083835 | 3083835 | PRJNA556992_P_NODE_773783_length_247_cov_2.448276_g771593_i0 | PRJNA556992 | 773783 | 247 | 2.448276 | 6.04724172 | Fimbriimonas sp. | 1936159 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2778022393|emb|OZ123194.1| | 1936159 | g771593 | i0 | 94.118 | 0.137651821862348 | 34 | 2 | 14 | 0 | 1 | 34 | 2514288 | 2514255 | MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 | blastn | 34 | 52.8 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas sp. | ||
| 7505017 | 7505017 | PRJNA556992_P_NODE_614706_length_257_cov_6.809783_g612517_i0 | PRJNA556992 | 614706 | 257 | 6.809783 | 17.50114231 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 309 | 1.26e-79 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g612517 | i0 | 88.627 | 456.898832684825 | 255 | 27 | 99 | 2 | 3 | 256 | 29518 | 29771 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 117423 | 309 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 8186010 | 8186010 | PRJNA556992_P_NODE_794767_length_246_cov_2.063584_g792577_i0 | PRJNA556992 | 794767 | 246 | 2.063584 | 5.07641664 | Capsulimonas corticalis | 2219043 | Bacteria | Bacteria | 82.4 | 2.83e-11 | NTclustered | gi|2240447379|dbj|AP025739.1| | 2219043 | g792577 | i0 | 87.5 | 0.292682926829268 | 72 | 7 | 29 | 2 | 165 | 235 | 4503019 | 4503089 | Capsulimonas corticalis AX-7 DNA, complete genome | blastn | 72 | 82.4 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadia | Capsulimonadales | Capsulimonadaceae | Capsulimonas | Capsulimonas corticalis | ||
| 9454446 | 9454446 | PRJNA556992_P_NODE_245768_length_307_cov_1.461538_g243580_i0 | PRJNA556992 | 245768 | 307 | 1.461538 | 4.48692166 | Armatimonadetes bacterium Uphvl-Ar1 | 2004467 | Bacteria | Bacteria | 523 | 5.049999999999998e-144 | NTclustered | gi|1199098093|gb|CP021423.1| | 2004467 | g243580 | i0 | 97.394 | 823.990228013029 | 307 | 8 | 100 | 0 | 1 | 307 | 1549848 | 1550154 | Armatimonadetes bacterium Uphvl-Ar1 genome | blastn | 252965 | 523 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadetes bacterium Uphvl-Ar1 | ||||||
| 9463769 | 9463769 | PRJNA556992_P_NODE_95988_length_410_cov_2.994065_g93804_i0 | PRJNA556992 | 95988 | 410 | 2.994065 | 12.2756665 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 69.4 | 3.91e-7 | NTclustered | gi|2108374973|gb|CP070648.1| | 2033014 | g93804 | i0 | 89.286 | 0.517073170731707 | 56 | 5 | 14 | 1 | 182 | 237 | 4356992 | 4356938 | MAG: Armatimonadetes bacterium isolate bin88 chromosome | blastn | 212 | 69.4 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 10738385 | 10738385 | PRJNA556992_P_NODE_882189_length_241_cov_7.011905_g879999_i0 | PRJNA556992 | 882189 | 241 | 7.011905 | 16.89869105 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 222 | 1.56e-53 | NTclustered | gi|2874253689|emb|OY969415.1| | 157466 | g879999 | i0 | 83.898 | 15.0041493775934 | 236 | 34 | 97 | 3 | 8 | 241 | 4531513 | 4531280 | MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 | blastn | 3616 | 222 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 12001836 | 12001836 | PRJNA556992_P_NODE_1092490_length_214_cov_6.971631_g1090299_i0 | PRJNA556992 | 1092490 | 214 | 6.971631 | 14.91929034 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 183 | 6.41e-42 | NTclustered | gi|2874254000|emb|OY970325.1| | 157466 | g1090299 | i0 | 83.092 | 170.883177570093 | 207 | 29 | 96 | 5 | 3 | 207 | 1306820 | 1307022 | MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 | blastn | 36569 | 183 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 12004050 | 12004050 | PRJNA556992_P_NODE_186850_length_334_cov_4.417625_g184662_i0 | PRJNA556992 | 186850 | 334 | 4.417625 | 14.7548675 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 65.8 | 4.04e-6 | NTclustered | gi|2874253701|emb|OY969427.1| | 157466 | g184662 | i0 | 93.182 | 0.323353293413174 | 44 | 3 | 13 | 0 | 223 | 266 | 953204 | 953161 | MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 | blastn | 108 | 65.8 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 12005654 | 12005654 | PRJNA556992_P_NODE_290310_length_290_cov_2.603687_g288121_i0 | PRJNA556992 | 290310 | 290 | 2.603687 | 7.5506923 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 108 | 5.65e-19 | NTclustered | gi|2874253971|emb|OY970296.1| | 157466 | g288121 | i0 | 78.947 | 19.9551724137931 | 171 | 27 | 58 | 6 | 122 | 290 | 3034405 | 3034568 | MAG: uncultured Armatimonadetes bacterium isolate MFD04408.bin.1.1 genome assembly, chromosome: 1 | blastn | 5787 | 108 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 12606838 | 12606838 | PRJNA556992_P_NODE_895470_length_241_cov_1.250000_g893280_i0 | PRJNA556992 | 895470 | 241 | 1.25 | 3.0125 | Capsulimonas | 2494209 | Bacteria | Bacteria | 198 | 2.63e-46 | NTclustered | gi|2874253701|emb|OY969427.1| | 157466 | g893280 | i0 | 82.305 | 268.879668049793 | 243 | 30 | 99 | 8 | 1 | 240 | 3409129 | 3408897 | MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 | blastn | 64800 | 200 | 0.99 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 13288446 | 13288446 | PRJNA556992_P_NODE_892611_length_241_cov_1.761905_g890421_i0 | PRJNA556992 | 892611 | 241 | 1.761905 | 4.24619105 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 124 | 4.53e-24 | NTclustered | gi|2621703062|emb|OY760504.1| | 2033014 | g890421 | i0 | 77.67 | 63.7219917012448 | 206 | 44 | 85 | 2 | 37 | 241 | 2409339 | 2409135 | MAG: Armatimonadota bacterium isolate be0b92b7-bbec-405b-9e81-a5dbe9f1ff7a genome assembly, chromosome: 1 | blastn | 15357 | 124 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 14554983 | 14554983 | PRJNA556992_P_NODE_242852_length_308_cov_2.523404_g240664_i0 | PRJNA556992 | 242852 | 308 | 2.523404 | 7.77208432 | Armatimonadetes bacterium Uphvl-Ar1 | 2004467 | Bacteria | Bacteria | 520 | 6.559999999999998e-143 | NTclustered | gi|1199098093|gb|CP021423.1| | 2004467 | g240664 | i0 | 97.078 | 249.386363636364 | 308 | 9 | 100 | 0 | 1 | 308 | 1548426 | 1548733 | Armatimonadetes bacterium Uphvl-Ar1 genome | blastn | 76811 | 520 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadetes bacterium Uphvl-Ar1 | ||||||
| 14561061 | 14561061 | PRJNA556992_P_NODE_710532_length_250_cov_4.700565_g708343_i0 | PRJNA556992 | 710532 | 250 | 4.700565 | 11.7514125 | Fimbriimonas ginsengisoli | 1005039 | Bacteria | Bacteria | 147 | 1.01e-30 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g708343 | i0 | 100 | 32.624 | 79 | 0 | 32 | 0 | 63 | 141 | 3264832 | 3264754 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 8156 | 147 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 16429746 | 16429746 | PRJNA556992_P_NODE_636553_length_256_cov_1.661202_g634364_i0 | PRJNA556992 | 636553 | 256 | 1.661202 | 4.25267712 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 296 | 9.74e-76 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g634364 | i0 | 88.095 | 26.3203125 | 252 | 27 | 98 | 3 | 1 | 251 | 27919 | 28168 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 6738 | 296 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 17704767 | 17704767 | PRJNA556992_P_NODE_586194_length_260_cov_1.647059_g584005_i0 | PRJNA556992 | 586194 | 260 | 1.647059 | 4.2823534 | Chthonomonas | 1077265 | Bacteria | Bacteria | 158 | 4.88e-34 | NTclustered | gi|526641997|ref|NR_103994.1| | 454171 | g584005 | i0 | 83.616 | 11.0384615384615 | 177 | 20 | 67 | 7 | 85 | 259 | 1436 | 1267 | Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence | blastn | 2870 | 158 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonas | Chthonomonas calidirosea | ||
| 18379957 | 18379957 | PRJNA556992_P_NODE_392315_length_277_cov_2.637255_g390126_i0 | PRJNA556992 | 392315 | 277 | 2.637255 | 7.30519635 | Armatimonadetes bacterium Uphvl-Ar2 | 2004468 | Bacteria | Bacteria | 128 | 4.12e-25 | NTclustered | gi|1199101103|gb|CP021424.1| | 2004468 | g390126 | i0 | 84.615 | 1.49819494584838 | 130 | 18 | 47 | 2 | 39 | 167 | 313661 | 313789 | Armatimonadetes bacterium Uphvl-Ar2 genome | blastn | 415 | 128 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadetes bacterium Uphvl-Ar2 | ||||||
| 18387116 | 18387116 | PRJNA556992_P_NODE_961735_length_234_cov_4.347826_g959545_i0 | PRJNA556992 | 961735 | 234 | 4.347826 | 10.17391284 | Fimbriimonas sp. | 1936159 | Bacteria | Bacteria | 200 | 7.07e-47 | NTclustered | gi|2778022393|emb|OZ123194.1| | 1936159 | g959545 | i0 | 82.819 | 1.43589743589744 | 227 | 35 | 96 | 4 | 1 | 225 | 1320481 | 1320705 | MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 | blastn | 336 | 200 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas sp. | ||
| 19652945 | 19652945 | PRJNA556992_P_NODE_28036_length_649_cov_3.232639_g25962_i0 | PRJNA556992 | 28036 | 649 | 3.232639 | 20.97982711 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 291 | 1.26e-73 | NTclustered | gi|2621703062|emb|OY760504.1| | 2033014 | g25962 | i0 | 79.128 | 61.8859784283513 | 436 | 79 | 66 | 12 | 45 | 474 | 2409533 | 2409104 | MAG: Armatimonadota bacterium isolate be0b92b7-bbec-405b-9e81-a5dbe9f1ff7a genome assembly, chromosome: 1 | blastn | 40164 | 291 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 19656176 | 19656176 | PRJNA556992_P_NODE_5316_length_1399_cov_10.659125_g4030_i1 | PRJNA556992 | 5316 | 1399 | 10.659125 | 149.12115875 | Fimbriimonadaceae bacterium | 2682144 | Bacteria | Bacteria | 1428 | 0 | NTclustered | gi|2076452338|gb|CP075364.1| | 2682144 | g4030 | i1 | 85.392 | 190.784846318799 | 1417 | 162 | 100 | 32 | 1 | 1399 | 667863 | 669252 | MAG: Fimbriimonadaceae bacterium isolate ACE_ARM1 chromosome | blastn | 266908 | 1428 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonadaceae bacterium | |||
| 20924313 | 20924313 | PRJNA556992_P_NODE_1033997_length_227_cov_2.675325_g1031807_i0 | PRJNA556992 | 1033997 | 227 | 2.675325 | 6.07298775 | Armatimonadetes bacterium Uphvl-Ar1 | 2004467 | Bacteria | Bacteria | 359 | 1.06e-94 | NTclustered | gi|1199098093|gb|CP021423.1| | 2004467 | g1031807 | i0 | 95.154 | 94.1453744493392 | 227 | 11 | 100 | 0 | 1 | 227 | 1550883 | 1550657 | Armatimonadetes bacterium Uphvl-Ar1 genome | blastn | 21371 | 359 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadetes bacterium Uphvl-Ar1 | ||||||
| 20928354 | 20928354 | PRJNA556992_P_NODE_261157_length_300_cov_2.035242_g258968_i0 | PRJNA556992 | 261157 | 300 | 2.035242 | 6.105726 | Fimbriimonas ginsengisoli | 1005039 | Bacteria | Bacteria | 243 | 1.5400000000000001e-59 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g258968 | i0 | 83.219 | 45.4133333333333 | 292 | 22 | 94 | 13 | 1 | 282 | 2045024 | 2045298 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 13624 | 243 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 20935152 | 20935152 | PRJNA556992_P_NODE_792957_length_246_cov_2.421965_g790767_i0 | PRJNA556992 | 792957 | 246 | 2.421965 | 5.9580339 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 174 | 4.55e-39 | NTclustered | gi|2874254000|emb|OY970325.1| | 157466 | g790767 | i0 | 87.582 | 124.552845528455 | 153 | 16 | 61 | 3 | 2 | 152 | 1306122 | 1306273 | MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 | blastn | 30640 | 174 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 22211673 | 22211673 | PRJNA556992_P_NODE_908358_length_240_cov_2.497006_g906168_i0 | PRJNA556992 | 908358 | 240 | 2.497006 | 5.9928144 | Capsulimonas corticalis | 2219043 | Bacteria | Bacteria | 119 | 2.1e-22 | NTclustered | gi|2240447379|dbj|AP025739.1| | 2219043 | g906168 | i0 | 94.737 | 3.7875 | 76 | 4 | 32 | 0 | 165 | 240 | 1402104 | 1402029 | Capsulimonas corticalis AX-7 DNA, complete genome | blastn | 909 | 119 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadia | Capsulimonadales | Capsulimonadaceae | Capsulimonas | Capsulimonas corticalis | ||
| 24760425 | 24760425 | PRJNA556992_P_NODE_880100_length_242_cov_0.911243_g877910_i0 | PRJNA556992 | 880100 | 242 | 0.911243 | 2.20520806 | Fimbriimonadaceae bacterium | 2682144 | Bacteria | Bacteria | 313 | 9.06e-81 | NTclustered | gi|2076449834|gb|CP075365.1| | 2682144 | g877910 | i0 | 90.083 | 545.392561983471 | 242 | 23 | 100 | 1 | 1 | 242 | 1879407 | 1879647 | MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome | blastn | 131985 | 313 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;