RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_kingdom = "Sangervirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Sangervirae · 3 ✖

bioproject 1

  • PRJNA556992 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5628494 5628494 PRJNA556992_P_NODE_153205_length_356_cov_1.710247_g151017_i0 PRJNA556992 153205 356 1.710247 6.08847932 Microviridae sp. 2202644 Viruses Viruses 505 2.15e-138   NTclustered gi|2057883726|tpg|BK050880.1| 2202644 g151017 i0 92.179 4.00561797752809 358 26 100 1 1 356 1216 859 MAG TPA_asm: Microviridae sp. isolate ct5wH15, partial genome blastn 1426 505 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.
5631242 5631242 PRJNA556992_P_NODE_334625_length_284_cov_1.459716_g332436_i0 PRJNA556992 334625 284 1.459716 4.14559344 Microvirus D_HF6_100 3071187 Viruses Viruses 381 2.9399999999999995e-101   NTclustered gi|2566892290|gb|OR149007.1| 3071187 g332436 i0 90.845 3 284 26 100 0 1 284 1727 1444 Microvirus D_HF6_100, complete genome blastn 852 381 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microvirus D_HF6_100
18379248 18379248 PRJNA556992_P_NODE_341875_length_283_cov_1.738095_g339686_i0 PRJNA556992 341875 283 1.738095 4.91880885 Microvirus sp. 2202559 Viruses Viruses 56.5 0.002   NTclustered gi|1832329955|gb|MT309986.1| 2202559 g339686 i0 100 0.106007067137809 30 0 11 0 191 220 4280 4309 MAG: Microvirus sp. isolate BS1_350, complete genome blastn 30 56.5 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;