contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_clade = "delta/epsilon subdivisions"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 529938 | 529938 | PRJNA556992_P_NODE_53861_length_498_cov_10.720000_g51698_i0 | PRJNA556992 | 53861 | 498 | 10.72 | 53.3856 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 749 | 0 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g51698 | i0 | 93.8 | 172.654618473896 | 500 | 27 | 100 | 4 | 1 | 498 | 14177 | 14674 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 85982 | 749 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 3085769 | 3085769 | PRJNA556992_P_NODE_927083_length_238_cov_2.696970_g924893_i0 | PRJNA556992 | 927083 | 238 | 2.69697 | 6.4187886 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 346 | 8.76e-91 | NTclustered | gi|451917299|gb|KC451163.1| | 34034 | g924893 | i0 | 93.22 | 78.1050420168067 | 236 | 15 | 99 | 1 | 1 | 236 | 294 | 60 | Uncultured delta proteobacterium clone RLBp1714 16S ribosomal RNA gene, partial sequence | blastn | 18589 | 346 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 3678117 | 3678117 | PRJNA556992_P_NODE_60223_length_478_cov_4.822222_g58055_i0 | PRJNA556992 | 60223 | 478 | 4.822222 | 23.05022116 | Bacteria | 2 | Bacteria | Bacteria | 701 | 0 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g58055 | i0 | 93.096 | 144.962343096234 | 478 | 33 | 100 | 0 | 1 | 478 | 14674 | 14197 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 69292 | 701 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 4359531 | 4359531 | PRJNA556992_P_NODE_724904_length_250_cov_0.870056_g722715_i0 | PRJNA556992 | 724904 | 250 | 0.870056 | 2.17514 | Deltaproteobacteria bacterium Smac51 | 2946587 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2242725236|gb|CP026657.1| | 2946587 | g722715 | i0 | 92.308 | 0.156 | 39 | 2 | 15 | 1 | 118 | 155 | 2579772 | 2579810 | Deltaproteobacteria bacterium Smac51 chromosome, complete genome | blastn | 39 | 54.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium Smac51 | ||||||
| 5634666 | 5634666 | PRJNA556992_P_NODE_60265_length_478_cov_3.488889_g58097_i0 | PRJNA556992 | 60265 | 478 | 3.488889 | 16.67688942 | uncultured delta proteobacterium HF0010_01J10 | 710820 | Bacteria | Bacteria | 507 | 8.26e-139 | NTclustered | gi|297180392|gb|GU474842.1| | 710820 | g58097 | i0 | 86.042 | 157.617154811715 | 480 | 58 | 99 | 7 | 2 | 478 | 14395 | 14868 | Uncultured delta proteobacterium HF0010_01J10 genomic sequence | blastn | 75341 | 507 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0010_01J10 | ||||||
| 5637360 | 5637360 | PRJNA556992_P_NODE_823145_length_245_cov_0.895349_g820955_i0 | PRJNA556992 | 823145 | 245 | 0.895349 | 2.19360505 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 296 | 9.249999999999999e-76 | NTclustered | gi|2874253999|emb|OY970324.1| | 34034 | g820955 | i0 | 88.618 | 171.044897959184 | 246 | 25 | 100 | 3 | 1 | 245 | 82318 | 82561 | MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 | blastn | 41906 | 296 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 6902235 | 6902235 | PRJNA556992_P_NODE_133726_length_371_cov_1.718121_g131539_i0 | PRJNA556992 | 133726 | 371 | 1.718121 | 6.37422891 | uncultured delta proteobacterium DeepAnt-1F12 | 357894 | Bacteria | Bacteria | 459 | 1.7799999999999998e-124 | NTclustered | gi|82617822|gb|DQ267495.1| | 357894 | g131539 | i0 | 88.947 | 210.948787061995 | 380 | 30 | 99 | 5 | 1 | 369 | 4446 | 4068 | Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence | blastn | 78262 | 459 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-1F12 | ||||||
| 6905289 | 6905289 | PRJNA556992_P_NODE_3326_length_1700_cov_4.314690_g2691_i0 | PRJNA556992 | 3326 | 1700 | 4.31469 | 73.34973 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 1897 | 0 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g2691 | i0 | 86.934 | 135.452941176471 | 1722 | 185 | 100 | 35 | 1 | 1700 | 13852 | 12149 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 230270 | 1897 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 6905647 | 6905647 | PRJNA556992_P_NODE_358126_length_281_cov_1.908654_g355937_i0 | PRJNA556992 | 358126 | 281 | 1.908654 | 5.36331774 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 351 | 2.28e-92 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g355937 | i0 | 89.855 | 145.562277580071 | 276 | 24 | 97 | 3 | 1 | 273 | 13351 | 13625 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 40903 | 351 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 10738950 | 10738950 | PRJNA556992_P_NODE_927529_length_238_cov_2.581818_g925339_i0 | PRJNA556992 | 927529 | 238 | 2.581818 | 6.14472684 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g925339 | i0 | 100 | 0.117647058823529 | 28 | 0 | 12 | 0 | 3 | 30 | 3927131 | 3927104 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 12006539 | 12006539 | PRJNA556992_P_NODE_354950_length_281_cov_3.812500_g352761_i0 | PRJNA556992 | 354950 | 281 | 3.8125 | 10.713125 | uncultured delta proteobacterium HF0010_01J10 | 710820 | Bacteria | Bacteria | 326 | 1.38e-84 | NTclustered | gi|297180392|gb|GU474842.1| | 710820 | g352761 | i0 | 87.544 | 218.056939501779 | 281 | 35 | 100 | 0 | 1 | 281 | 12617 | 12897 | Uncultured delta proteobacterium HF0010_01J10 genomic sequence | blastn | 61274 | 326 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0010_01J10 | ||||||
| 12007717 | 12007717 | PRJNA556992_P_NODE_44570_length_536_cov_1.948164_g42415_i0 | PRJNA556992 | 44570 | 536 | 1.948164 | 10.44215904 | uncultured delta proteobacterium HF0010_01J10 | 710820 | Bacteria | Bacteria | 686 | 0 | NTclustered | gi|297180392|gb|GU474842.1| | 710820 | g42415 | i0 | 89.944 | 166.011194029851 | 537 | 47 | 99 | 6 | 2 | 536 | 13854 | 14385 | Uncultured delta proteobacterium HF0010_01J10 genomic sequence | blastn | 88982 | 686 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0010_01J10 | ||||||
| 15830956 | 15830956 | PRJNA556992_P_NODE_391653_length_277_cov_2.995098_g389464_i0 | PRJNA556992 | 391653 | 277 | 2.995098 | 8.29642146 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 60.2 | 1.52e-4 | NTclustered | gi|2874253674|emb|OY969108.1| | 34034 | g389464 | i0 | 97.143 | 7.09025270758123 | 35 | 1 | 13 | 0 | 85 | 119 | 1519823 | 1519857 | MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 | blastn | 1964 | 60.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 15833362 | 15833362 | PRJNA556992_P_NODE_58873_length_482_cov_3.841076_g56705_i0 | PRJNA556992 | 58873 | 482 | 3.841076 | 18.51398632 | uncultured delta proteobacterium HF0010_01J10 | 710820 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|297180392|gb|GU474842.1| | 710820 | g56705 | i0 | 91.268 | 216.348547717842 | 481 | 41 | 99 | 1 | 3 | 482 | 13774 | 14254 | Uncultured delta proteobacterium HF0010_01J10 genomic sequence | blastn | 104280 | 654 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0010_01J10 | ||||||
| 15836468 | 15836468 | PRJNA556992_P_NODE_837853_length_244_cov_0.900585_g835663_i0 | PRJNA556992 | 837853 | 244 | 0.900585 | 2.1974274 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 309 | 1.1800000000000002e-79 | NTclustered | gi|2874253999|emb|OY970324.1| | 34034 | g835663 | i0 | 89.474 | 147.745901639344 | 247 | 22 | 100 | 3 | 1 | 244 | 83034 | 83279 | MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 | blastn | 36050 | 309 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 18381985 | 18381985 | PRJNA556992_P_NODE_5535_length_1375_cov_4.344854_g2691_i1 | PRJNA556992 | 5535 | 1375 | 4.344854 | 59.7417425 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 1642 | 0 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g2691 | i1 | 88.295 | 139.901090909091 | 1384 | 144 | 100 | 15 | 1 | 1375 | 12149 | 13523 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 192364 | 1642 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;