RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 4 ✖

bioproject 1

  • PRJNA556992 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1807530 1807530 PRJNA556992_P_NODE_698802_length_251_cov_1.943820_g696613_i0 PRJNA556992 698802 251 1.94382 4.8789882 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 115 2.86e-21   NTclustered gi|2531976037|emb|OY282375.1| 312019 g696613 i0 75.294 11.4143426294821 255 55 100 8 1 251 301766 301516 MAG: uncultured Candidatus Entotheonella sp. genome assembly, chromosome: 1 blastn 2865 115 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
8178377 8178377 PRJNA556992_P_NODE_214727_length_319_cov_3.093496_g212539_i0 PRJNA556992 214727 319 3.093496 9.86825224 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 329 1.23e-85   NTclustered gi|2518596677|emb|OX639990.1| 312019 g212539 i0 85.266 7.86520376175549 319 47 100 0 1 319 2629193 2628875 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 2509 329 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
9454186 9454186 PRJNA556992_P_NODE_227628_length_313_cov_1.475000_g225440_i0 PRJNA556992 227628 313 1.475 4.61675 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 267 9.6e-67   NTclustered gi|2518596677|emb|OX639990.1| 312019 g225440 i0 82.886 849.041533546326 298 49 95 2 14 310 2630193 2630489 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 265750 267 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
12003654 12003654 PRJNA556992_P_NODE_16290_length_833_cov_4.218421_g14490_i0 PRJNA556992 16290 833 4.218421 35.13944693 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 900 0   NTclustered gi|2518596677|emb|OX639990.1| 312019 g14490 i0 86.364 226.891956782713 836 100 99 12 2 833 2629205 2630030 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 189001 900 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;