RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_clade = "Metamonada"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 8 ✖

bioproject 1

  • PRJNA556992 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
527375 527375 PRJNA556992_P_NODE_334081_length_284_cov_1.715640_g331892_i0 PRJNA556992 334081 284 1.71564 4.8724176 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 52.8 0.026   NTclustered gi|2319646654|ref|XM_001321867.2| 412133 g331892 i0 100 0.197183098591549 28 0 10 0 2 29 1636 1663 Trichomonas vaginalis G3 spectrin binding (TVAGG3_0311940), partial mRNA blastn 56 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
6901540 6901540 PRJNA556992_P_NODE_1142426_length_203_cov_5.153846_g1140235_i0 PRJNA556992 1142426 203 5.153846 10.46230738 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.001   NTclustered gi|2794976197|ref|XM_067867937.1| 2049356 g1140235 i0 100 0.295566502463054 30 0 15 0 106 135 415 386 Monocercomonoides exilis uncharacterized protein (MONOS_15084), partial mRNA blastn 60 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
8779977 8779977 PRJNA556992_P_NODE_667367_length_253_cov_3.616667_g665178_i0 PRJNA556992 667367 253 3.616667 9.15016751 Monocercomonoides 302781 Preaxostyla other_Eukaryota 285 2.08e-72   NTclustered gi|156708125|gb|EF474120.1| 302782 g665178 i0 89.177 85.498023715415 231 22 91 3 25 253 1271 1042 Monocercomonoides sp. PA clone 1/4 tubulin alpha subunit mRNA, complete cds blastn 21631 285 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides sp. PA
9459811 9459811 PRJNA556992_P_NODE_649708_length_255_cov_1.565934_g647519_i0 PRJNA556992 649708 255 1.565934 3.9931317 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 455 1.51e-123   NTclustered gi|2319615589|ref|XR_007835968.1| 412133 g647519 i0 98.824 76.8941176470588 255 3 100 0 1 255 2160 2414 Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0033920), rRNA blastn 19608 455 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
9460629 9460629 PRJNA556992_P_NODE_715728_length_250_cov_2.457627_g713539_i0 PRJNA556992 715728 250 2.457627 6.1440675 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.023   NTclustered gi|2794957498|ref|XM_067874386.1| 2049356 g713539 i0 100 0.112 28 0 11 0 12 39 2899 2926 Monocercomonoides exilis uncharacterized protein (MONOS_4321), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
15828142 15828142 PRJNA556992_P_NODE_199433_length_327_cov_3.783465_g197245_i0 PRJNA556992 199433 327 3.783465 12.37193055 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 56.5 0.002   NTclustered gi|2794861155|ref|XM_067921658.1| 135588 g197245 i0 100 0.0917431192660551 30 0 9 0 218 247 1016 1045 Histomonas meleagridis Ubiquitin-like modifier-activating enzyme 1 (GO595_000811), partial mRNA blastn 30 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
15829908 15829908 PRJNA556992_P_NODE_31573_length_616_cov_14.141805_g29465_i0 PRJNA556992 31573 616 14.141805 87.1135188 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 63.9 2.82e-5   NTclustered gi|2794954125|ref|XM_067876446.1| 2049356 g29465 i0 91.489 1.79058441558442 47 2 7 2 76 121 2143 2098 Monocercomonoides exilis putative N-terminal C2 containing protein (MONOS_623), mRNA blastn 1103 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16430511 16430511 PRJNA556992_P_NODE_860253_length_243_cov_0.905882_g858063_i0 PRJNA556992 860253 243 0.905882 2.20129326 Giardia 5740 Fornicata other_Eukaryota 390 4.089999999999999e-104   NTclustered gi|1940865969|ref|XR_005248676.1| 5741 g858063 i0 95.885 11.1810699588477 243 7 100 1 1 243 1433 1672 Giardia intestinalis 28S ribosomal RNA (GL50803_00r40029), partial rRNA blastn 2717 390 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;