RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA556992" and tax_clade = "Jingmenvirus group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Jingmenvirus group · 2 ✖

bioproject 1

  • PRJNA556992 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1806028 1806028 PRJNA556992_P_NODE_574322_length_261_cov_1.617021_g572133_i0 PRJNA556992 574322 261 1.617021 4.22042481 Wuhan aphid virus 1 1746067 Viruses Viruses 215 2.87e-51   NTclustered gi|1946667006|gb|MW023850.1| 1746067 g572133 i0 83.7 0.869731800766284 227 37 87 0 4 230 2096 1870 Wuhan aphid virus 1 strain STN1WV1 putative capsid protein and hypothetical protein genes, complete cds blastn 227 215 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan aphid virus 1
24761375 24761375 PRJNA556992_P_NODE_957480_length_235_cov_2.401235_g955290_i0 PRJNA556992 957480 235 2.401235 5.64290225 Wuhan aphid virus 1 1746067 Viruses Viruses 291 4.1e-74   NTclustered gi|1817956135|dbj|LC516841.1| 1746067 g955290 i0 88.983 2.99574468085106 236 24 100 2 1 235 674 440 Wuhan aphid virus 1 06BaA3 gene for non-structural protein 2, complete cds blastn 704 291 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan aphid virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;