RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA554794" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA554794 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14549970 14549970 PRJNA554794_P_NODE_23092_length_165_cov_1.017241_g19163_i0 PRJNA554794 23092 165 1.017241 1.67844765 Sycon ciliatum 27933 Porifera other_Eukaryota 117 4.82e-22   NTclustered gi|2732934263|ref|XM_065334202.1| 27933 g19163 i0 80.247 0.981818181818182 162 26 96 6 7 165 472 314 PREDICTED: Sycon ciliatum large ribosomal subunit protein uL3-like (LOC135821136), mRNA blastn 162 117 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
18372676 18372676 PRJNA554794_P_NODE_21615_length_178_cov_0.930233_g17686_i0 PRJNA554794 21615 178 0.930233 1.65581474 Sycon ciliatum 27933 Porifera other_Eukaryota 106 1.14e-18   NTclustered gi|2732914053|ref|XM_065323850.1| 27933 g17686 i0 79.31 1.2247191011236 174 19 89 10 2 159 1153 1325 PREDICTED: Sycon ciliatum plastin-3-like (LOC135810357), mRNA blastn 218 106 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
21525666 21525666 PRJNA554794_P_NODE_3117_length_1691_cov_5.038368_g1154_i0 PRJNA554794 3117 1691 5.038368 85.19880288 Mycale 86015 Porifera other_Eukaryota 176 9.9e-39   NTclustered gi|514227091|gb|KC961671.1| 458504 g1154 i0 83.333 12.929627439385 198 25 12 6 58 252 289 97 Mycale laxissima voucher UERJ4 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 21864 176 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Poecilosclerida Mycalidae Mycale Mycale laxissima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;