contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA551951" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1796203 | 1796203 | PRJNA551951_S_NODE_2802_length_561_cov_98.539924_g2695_i0 | PRJNA551951 | 2802 | 561 | 98.539924 | 552.80897364 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 813 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g2695 | i0 | 95.155 | 157.966131907308 | 516 | 23 | 92 | 2 | 45 | 559 | 51590 | 52104 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 88619 | 813 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 1796233 | 1796233 | PRJNA551951_S_NODE_462_length_1300_cov_46.343083_g393_i1 | PRJNA551951 | 462 | 1300 | 46.343083 | 602.460079 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 2390 | 0 | NTclustered | gi|1276714546|gb|CP024702.1| | 2663009 | g393 | i1 | 99.846 | 481.932307692308 | 1300 | 2 | 100 | 0 | 1 | 1300 | 1174914 | 1176213 | Fusobacterium pseudoperiodonticum strain KCOM 1282 chromosome, complete genome | blastn | 626512 | 2390 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 1796241 | 1796241 | PRJNA551951_S_NODE_542_length_1199_cov_91.604811_g347_i3 | PRJNA551951 | 542 | 1199 | 91.604811 | 1098.34168389 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 2135 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g347 | i3 | 99.239 | 510.040867389491 | 1183 | 9 | 99 | 0 | 17 | 1199 | 2454048 | 2455230 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 611539 | 2135 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 2398451 | 2398451 | PRJNA551951_S_NODE_6422_length_333_cov_2.966443_g6304_i0 | PRJNA551951 | 6422 | 333 | 2.966443 | 9.87825519 | Fusobacterium | 848 | Bacteria | Bacteria | 575 | 1.5099999999999999e-159 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g6304 | i0 | 99.682 | 793.771771771772 | 314 | 1 | 95 | 0 | 1 | 314 | 1812905 | 1812592 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 264326 | 575 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 3071620 | 3071620 | PRJNA551951_S_NODE_903_length_965_cov_99.598925_g347_i6 | PRJNA551951 | 903 | 965 | 99.598925 | 961.12962625 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 1676 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g347 | i6 | 99.141 | 549.382383419689 | 931 | 8 | 96 | 0 | 1 | 931 | 2454300 | 2455230 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 530154 | 1676 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 4951136 | 4951136 | PRJNA551951_S_NODE_544_length_1198_cov_85.032674_g347_i4 | PRJNA551951 | 544 | 1198 | 85.032674 | 1018.69143452 | Leptotrichia | 32067 | Bacteria | Bacteria | 2037 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g347 | i4 | 97.8 | 501.419031719533 | 1182 | 25 | 99 | 1 | 17 | 1198 | 2373354 | 2374534 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 600700 | 2050 | 0.993658536585366 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 4951154 | 4951154 | PRJNA551951_S_NODE_604_length_1143_cov_47.148917_g393_i2 | PRJNA551951 | 604 | 1143 | 47.148917 | 538.91212131 | Fusobacterium | 848 | Bacteria | Bacteria | 2010 | 0 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g393 | i2 | 98.424 | 499.055118110236 | 1142 | 18 | 99 | 0 | 2 | 1143 | 463206 | 462065 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 570420 | 2021 | 0.994557149925779 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 5624461 | 5624461 | PRJNA551951_S_NODE_545_length_1198_cov_82.841788_g347_i5 | PRJNA551951 | 545 | 1198 | 82.841788 | 992.44462024 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 2023 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g347 | i5 | 97.549 | 500.465776293823 | 1183 | 28 | 99 | 1 | 17 | 1198 | 2454048 | 2455230 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 599558 | 2023 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 8173366 | 8173366 | PRJNA551951_S_NODE_3927_length_459_cov_8.556604_g3812_i0 | PRJNA551951 | 3927 | 459 | 8.556604 | 39.27481236 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 616 | 1.2599999999999999e-171 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g3812 | i0 | 90.85 | 1 | 459 | 42 | 100 | 0 | 1 | 459 | 2147851 | 2147393 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 459 | 616 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 9448961 | 9448961 | PRJNA551951_S_NODE_17428_length_152_cov_2.880342_g17310_i0 | PRJNA551951 | 17428 | 152 | 2.880342 | 4.37811984 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 276 | 6.770000000000001e-70 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g17310 | i0 | 100 | 289.888157894737 | 149 | 0 | 98 | 0 | 2 | 150 | 25404 | 25256 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 44063 | 276 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 9449083 | 9449083 | PRJNA551951_S_NODE_9148_length_254_cov_4.401826_g9030_i0 | PRJNA551951 | 9148 | 254 | 4.401826 | 11.18063804 | Leptotrichia sp. oral taxon 498 | 712368 | Bacteria | Bacteria | 387 | 5.569999999999998e-103 | NTclustered | gi|1227268105|gb|CP016753.1| | 712368 | g9030 | i0 | 98.624 | 48.6141732283465 | 218 | 3 | 86 | 0 | 37 | 254 | 592622 | 592839 | Leptotrichia sp. oral taxon 498, complete genome | blastn | 12348 | 387 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 498 | ||
| 10051373 | 10051373 | PRJNA551951_S_NODE_368_length_1416_cov_69.971760_g347_i0 | PRJNA551951 | 368 | 1416 | 69.97176 | 990.8001216 | Leptotrichia | 32067 | Bacteria | Bacteria | 2455 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g347 | i0 | 98.423 | 464.872881355932 | 1395 | 22 | 99 | 0 | 1 | 1395 | 499062 | 497668 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 658260 | 2455 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 13274629 | 13274629 | PRJNA551951_S_NODE_411_length_1358_cov_74.167800_g347_i1 | PRJNA551951 | 411 | 1358 | 74.1678 | 1007.198724 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 2231 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g347 | i1 | 96.332 | 545.260677466863 | 1363 | 41 | 100 | 7 | 1 | 1358 | 2455230 | 2453872 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 740464 | 2231 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 14549580 | 14549580 | PRJNA551951_S_NODE_16232_length_160_cov_2.208000_g16114_i0 | PRJNA551951 | 16232 | 160 | 2.208 | 3.5328 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 296 | 5.55e-76 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g16114 | i0 | 100 | 99.94375 | 160 | 0 | 100 | 0 | 1 | 160 | 2276153 | 2276312 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 15991 | 296 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 15150948 | 15150948 | PRJNA551951_S_NODE_14192_length_178_cov_2.097902_g14074_i0 | PRJNA551951 | 14192 | 178 | 2.097902 | 3.73426556 | Fusobacterium | 848 | Bacteria | Bacteria | 329 | 6.21e-86 | NTclustered | gi|2446175567|gb|CP117964.1| | 851 | g14074 | i0 | 100 | 22.2191011235955 | 178 | 0 | 100 | 0 | 1 | 178 | 1633914 | 1634091 | Fusobacterium nucleatum strain 2/1/50A chromosome, complete genome | blastn | 3955 | 329 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 16425587 | 16425587 | PRJNA551951_S_NODE_14533_length_174_cov_97.791367_g14415_i0 | PRJNA551951 | 14533 | 174 | 97.791367 | 170.15697858 | root | 1 | Root_unresolved | Root_unresolved | 322 | 1.01e-83 | NTclustered | gi|531874300|gb|KF444264.1| | 851 | g14415 | i0 | 100 | 115 | 174 | 0 | 100 | 0 | 1 | 174 | 858 | 1031 | Fusobacterium nucleatum strain YWH7413 16S ribosomal RNA gene, partial sequence | blastn | 20010 | 322 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 17098159 | 17098159 | PRJNA551951_S_NODE_2394_length_616_cov_3.839931_g2297_i0 | PRJNA551951 | 2394 | 616 | 3.839931 | 23.65397496 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 1083 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g2297 | i0 | 98.377 | 1 | 616 | 10 | 100 | 0 | 1 | 616 | 2148037 | 2148652 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 616 | 1083 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 18372420 | 18372420 | PRJNA551951_S_NODE_9075_length_256_cov_10.904977_g8957_i0 | PRJNA551951 | 9075 | 256 | 10.904977 | 27.91674112 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 339 | 1.5999999999999998e-88 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g8957 | i0 | 94.17 | 0.87109375 | 223 | 11 | 87 | 2 | 28 | 250 | 2146980 | 2147200 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 223 | 339 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 20249366 | 20249366 | PRJNA551951_S_NODE_13636_length_183_cov_16.641892_g13518_i0 | PRJNA551951 | 13636 | 183 | 16.641892 | 30.45466236 | root | 1 | Root_unresolved | Root_unresolved | 300 | 5.040000000000001e-77 | NTclustered | gi|285797932|gb|GU407914.1| | 851 | g13518 | i0 | 100 | 95.672131147541 | 162 | 0 | 89 | 0 | 22 | 183 | 330 | 491 | Fusobacterium nucleatum clone WWP_SS7_C07 16S ribosomal RNA gene, partial sequence | blastn | 17508 | 302 | 0.993377483443709 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 20249492 | 20249492 | PRJNA551951_S_NODE_416_length_1352_cov_46.958238_g393_i0 | PRJNA551951 | 416 | 1352 | 46.958238 | 634.87537776 | Fusobacterium | 848 | Bacteria | Bacteria | 2416 | 0 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g393 | i0 | 99.548 | 470.744082840237 | 1326 | 6 | 98 | 0 | 1 | 1326 | 463047 | 461722 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 636446 | 2438 | 0.990976210008203 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 22800194 | 22800194 | PRJNA551951_S_NODE_4558_length_419_cov_9.596354_g4443_i0 | PRJNA551951 | 4558 | 419 | 9.596354 | 40.20872326 | Fusobacterium | 848 | Bacteria | Bacteria | 704 | 0 | NTclustered | gi|2706424020|gb|CP077136.1| | 76857 | g4443 | i0 | 99.74 | 91.1217183770883 | 384 | 1 | 92 | 0 | 8 | 391 | 182929 | 182546 | Fusobacterium polymorphum strain KCOM3036 chromosome, complete genome | blastn | 38180 | 704 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 23473072 | 23473072 | PRJNA551951_S_NODE_539_length_1203_cov_83.099315_g347_i2 | PRJNA551951 | 539 | 1203 | 83.099315 | 999.68475945 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 1823 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g347 | i2 | 94.44 | 524.097256857855 | 1187 | 62 | 99 | 3 | 17 | 1203 | 2454048 | 2455230 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 630489 | 1823 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 23473104 | 23473104 | PRJNA551951_S_NODE_7559_length_294_cov_9.312741_g7441_i0 | PRJNA551951 | 7559 | 294 | 9.312741 | 27.37945854 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 544 | 3.69e-150 | NTclustered | gi|2706424020|gb|CP077136.1| | 76857 | g7441 | i0 | 100 | 247.125850340136 | 294 | 0 | 100 | 0 | 1 | 294 | 563020 | 563313 | Fusobacterium polymorphum strain KCOM3036 chromosome, complete genome | blastn | 72655 | 544 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 24746746 | 24746746 | PRJNA551951_S_NODE_13780_length_182_cov_1.931973_g13662_i0 | PRJNA551951 | 13780 | 182 | 1.931973 | 3.51619086 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 331 | 1.7800000000000002e-86 | NTclustered | gi|2706074160|gb|CP077112.1| | 76857 | g13662 | i0 | 99.451 | 100 | 182 | 1 | 100 | 0 | 1 | 182 | 2178766 | 2178947 | Fusobacterium polymorphum strain KCOM1272 chromosome, complete genome | blastn | 18200 | 331 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;