RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA550047" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA550047 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3064992 3064992 PRJNA550047_P_NODE_248603_length_300_cov_9.960352_g246634_i0 PRJNA550047 248603 300 9.960352 29.881056 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 139 2.08e-28   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g246634 i0 82.558 18.5833333333333 172 17 56 10 8 174 59067 58904 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 5575 139 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
6895241 6895241 PRJNA550047_P_NODE_516306_length_225_cov_7.138158_g514333_i0 PRJNA550047 516306 225 7.138158 16.0608555 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 193 1.13e-44   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g514333 i0 86.441 91.4266666666667 177 23 79 1 1 177 5031750 5031575 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 20571 193 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
9442047 9442047 PRJNA550047_P_NODE_208128_length_317_cov_15.926230_g206160_i0 PRJNA550047 208128 317 15.92623 50.4861491 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 475 1.49e-129   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g206160 i0 93.711 598.826498422713 318 19 100 1 1 317 5032101 5031784 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 189828 475 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
9447081 9447081 PRJNA550047_P_NODE_82508_length_345_cov_10.363971_g80548_i0 PRJNA550047 82508 345 10.363971 35.75569995 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 130 1.47e-25   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g80548 i0 82.667 16.1275362318841 150 23 43 3 2 149 117038 117186 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 5564 130 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
10721361 10721361 PRJNA550047_P_NODE_503909_length_229_cov_8.089744_g501936_i0 PRJNA550047 503909 229 8.089744 18.52551376 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 187 5.37e-43   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g501936 i0 82.174 5.58078602620087 230 30 97 10 6 227 5032833 5032607 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 1278 187 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
11993327 11993327 PRJNA550047_P_NODE_277670_length_299_cov_5.942478_g275701_i0 PRJNA550047 277670 299 5.942478 17.76800922 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 122 2.0899999999999994e-23   NTclustered gi|2874254122|emb|OY970207.1| 3107663 g275701 i0 82.609 0.919732441471572 138 24 46 0 153 290 2789831 2789968 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10113.bin.c.5 genome assembly, chromosome: 1 blastn 275 122 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;