contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA550047" and tax_phylum = "Thermomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2395236 | 2395236 | PRJNA550047_P_NODE_10482_length_587_cov_21.050584_g8690_i0 | PRJNA550047 | 10482 | 587 | 21.050584 | 123.56692808 | Sphaerobacter | 2056 | Bacteria | Bacteria | 401 | 4.999999999999999e-107 | NTclustered | gi|470485500|ref|NR_076704.1| | 2057 | g8690 | i0 | 80.102 | 182.182282793867 | 588 | 77 | 97 | 24 | 14 | 583 | 1113 | 548 | Sphaerobacter thermophilus strain S 6022 23S ribosomal RNA gene, complete sequence | blastn | 106941 | 401 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Sphaerobacterales | Sphaerobacteraceae | Sphaerobacter | Sphaerobacter thermophilus | ||
| 2395378 | 2395378 | PRJNA550047_P_NODE_12922_length_552_cov_8.096033_g11082_i0 | PRJNA550047 | 12922 | 552 | 8.096033 | 44.69010216 | Sphaerobacter | 2056 | Bacteria | Bacteria | 462 | 2.1199999999999995e-125 | NTclustered | gi|470485500|ref|NR_076704.1| | 2057 | g11082 | i0 | 82.111 | 244.909420289855 | 559 | 83 | 99 | 15 | 1 | 550 | 1223 | 673 | Sphaerobacter thermophilus strain S 6022 23S ribosomal RNA gene, complete sequence | blastn | 135190 | 462 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Sphaerobacterales | Sphaerobacteraceae | Sphaerobacter | Sphaerobacter thermophilus | ||
| 2397855 | 2397855 | PRJNA550047_P_NODE_7902_length_656_cov_21.406518_g6185_i0 | PRJNA550047 | 7902 | 656 | 21.406518 | 140.42675808 | Sphaerobacter | 2056 | Bacteria | Bacteria | 429 | 2.58e-115 | NTclustered | gi|470485500|ref|NR_076704.1| | 2057 | g6185 | i0 | 78.932 | 121.149390243902 | 674 | 110 | 99 | 21 | 1 | 650 | 707 | 42 | Sphaerobacter thermophilus strain S 6022 23S ribosomal RNA gene, complete sequence | blastn | 79474 | 429 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Sphaerobacterales | Sphaerobacteraceae | Sphaerobacter | Sphaerobacter thermophilus | ||
| 5620627 | 5620627 | PRJNA550047_P_NODE_466245_length_242_cov_1.828402_g464272_i0 | PRJNA550047 | 466245 | 242 | 1.828402 | 4.42473284 | Thermomicrobium roseum | 500 | Bacteria | Bacteria | 108 | 4.59e-19 | NTclustered | gi|221155340|gb|CP001275.1| | 309801 | g464272 | i0 | 75.641 | 24.7355371900826 | 234 | 48 | 95 | 9 | 1 | 229 | 332360 | 332589 | Thermomicrobium roseum DSM 5159, complete genome | blastn | 5986 | 108 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiaceae | Thermomicrobium | Thermomicrobium roseum | ||
| 8773977 | 8773977 | PRJNA550047_P_NODE_3327_length_1053_cov_16.419388_g1031_i1 | PRJNA550047 | 3327 | 1053 | 16.419388 | 172.89615564 | Sphaerobacter | 2056 | Bacteria | Bacteria | 649 | 0 | NTclustered | gi|470485500|ref|NR_076704.1| | 2057 | g1031 | i1 | 80.543 | 102.854700854701 | 884 | 138 | 83 | 20 | 8 | 883 | 670 | 1527 | Sphaerobacter thermophilus strain S 6022 23S ribosomal RNA gene, complete sequence | blastn | 108306 | 649 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Sphaerobacterales | Sphaerobacteraceae | Sphaerobacter | Sphaerobacter thermophilus | ||
| 11324446 | 11324446 | PRJNA550047_P_NODE_399189_length_265_cov_9.296875_g397217_i0 | PRJNA550047 | 399189 | 265 | 9.296875 | 24.63671875 | Thermomicrobium | 499 | Bacteria | Bacteria | 113 | 1.1e-20 | NTclustered | gi|507148389|ref|NR_103192.1| | 500 | g397217 | i0 | 77.941 | 21.5094339622642 | 204 | 29 | 74 | 16 | 69 | 263 | 426 | 230 | Thermomicrobium roseum strain DSM 5159 23S ribosomal RNA gene, complete sequence | blastn | 5700 | 113 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiaceae | Thermomicrobium | Thermomicrobium roseum | ||
| 16424000 | 16424000 | PRJNA550047_P_NODE_372853_length_275_cov_33.267327_g370881_i0 | PRJNA550047 | 372853 | 275 | 33.267327 | 91.48514925 | Thermomicrobium | 499 | Bacteria | Bacteria | 180 | 1.11e-40 | NTclustered | gi|507148389|ref|NR_103192.1| | 500 | g370881 | i0 | 79.078 | 150.407272727273 | 282 | 44 | 100 | 12 | 1 | 275 | 1136 | 863 | Thermomicrobium roseum strain DSM 5159 23S ribosomal RNA gene, complete sequence | blastn | 41362 | 180 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Thermomicrobiales | Thermomicrobiaceae | Thermomicrobium | Thermomicrobium roseum | ||
| 23470835 | 23470835 | PRJNA550047_P_NODE_60919_length_345_cov_14.658088_g58959_i0 | PRJNA550047 | 60919 | 345 | 14.658088 | 50.5704036 | Sphaerobacter thermophilus | 2057 | Bacteria | Bacteria | 137 | 8.76e-28 | NTclustered | gi|269785296|gb|CP001823.1| | 479434 | g58959 | i0 | 90.385 | 2.97971014492754 | 104 | 10 | 43 | 0 | 242 | 345 | 1711105 | 1711208 | Sphaerobacter thermophilus DSM 20745 chromosome 1, complete sequence | blastn | 1028 | 137 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Sphaerobacterales | Sphaerobacteraceae | Sphaerobacter | Sphaerobacter thermophilus | ||
| 25346725 | 25346725 | PRJNA550047_P_NODE_199320_length_343_cov_7.659259_g197359_i0 | PRJNA550047 | 199320 | 343 | 7.659259 | 26.27125837 | Sphaerobacter | 2056 | Bacteria | Bacteria | 359 | 1.7099999999999998e-94 | NTclustered | gi|470485500|ref|NR_076704.1| | 2057 | g197359 | i0 | 85.797 | 330.189504373178 | 345 | 41 | 99 | 7 | 3 | 343 | 881 | 1221 | Sphaerobacter thermophilus strain S 6022 23S ribosomal RNA gene, complete sequence | blastn | 113255 | 359 | 1 | Bacteria | Pseudomonadati | Thermomicrobiota | Thermomicrobia | Sphaerobacterales | Sphaerobacteraceae | Sphaerobacter | Sphaerobacter thermophilus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;