RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA550047" and tax_phylum = "Preplasmiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA550047 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1121648 1121648 PRJNA550047_P_NODE_46181_length_351_cov_20.388489_g44223_i0 PRJNA550047 46181 351 20.388489 71.56359639 root 1 Root_unresolved Root_unresolved 514 3.5199999999999997e-141   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g44223 i0 92.033 103.680911680912 364 11 99 2 6 351 12578 12215 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 36392 514 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
1122426 1122426 PRJNA550047_P_NODE_8021_length_652_cov_62.601036_g6301_i0 PRJNA550047 8021 652 62.601036 408.15875472 root 1 Root_unresolved Root_unresolved 1199 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g6301 i0 99.847 99.9907975460123 652 1 100 0 1 652 15377 14726 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 65194 1199 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
13875005 13875005 PRJNA550047_P_NODE_3351_length_1049_cov_12.981557_g2020_i0 PRJNA550047 3351 1049 12.981557 136.17653293 root 1 Root_unresolved Root_unresolved 1628 0   NTclustered gi|2452971169|gb|OQ518290.1| 10515 g2020 i0 99.333 100.123927550048 899 6 100 0 151 1049 16840 15942 Human adenovirus 2 isolate HAdV-C2/USA/2E10/2009, complete genome blastn 105030 1628 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15148410 15148410 PRJNA550047_P_NODE_1872_length_1565_cov_36.733244_g867_i0 PRJNA550047 1872 1565 36.733244 574.8752686 root 1 Root_unresolved Root_unresolved 2881 0   NTclustered gi|56160492|ref|AC_000007.1| 10515 g867 i0 100 99.6830670926518 1560 0 99 0 6 1565 12593 14152 Human adenovirus 2, complete genome blastn 156004 2881 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15150036 15150036 PRJNA550047_P_NODE_5232_length_800_cov_57.665750_g3672_i0 PRJNA550047 5232 800 57.66575 461.326 root 1 Root_unresolved Root_unresolved 1454 0   NTclustered gi|56160492|ref|AC_000007.1| 10515 g3672 i0 99.748 99.25 794 1 99 1 3 795 10861 11654 Human adenovirus 2, complete genome blastn 79400 1454 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
17698098 17698098 PRJNA550047_P_NODE_15214_length_526_cov_16.311258_g13343_i0 PRJNA550047 15214 526 16.311258 85.79721708 root 1 Root_unresolved Root_unresolved 972 0   NTclustered gi|2452972544|gb|OQ518325.1| 10515 g13343 i0 100 100.001901140684 526 0 100 0 1 526 15913 15388 Human adenovirus 2 isolate HAdV-C2/USA/4M8/2009, complete genome blastn 52601 972 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
21524282 21524282 PRJNA550047_P_NODE_5737_length_766_cov_30.731602_g4157_i0 PRJNA550047 5737 766 30.731602 235.40407132 root 1 Root_unresolved Root_unresolved 1112 0   NTclustered gi|56160492|ref|AC_000007.1| 10515 g4157 i0 99.835 89.4973890339426 605 1 89 0 162 766 11591 12195 Human adenovirus 2, complete genome blastn 68555 1112 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22797137 22797137 PRJNA550047_P_NODE_12698_length_554_cov_22.255717_g10867_i0 PRJNA550047 12698 554 22.255717 123.29667218 root 1 Root_unresolved Root_unresolved 1024 0   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g10867 i0 100 100 554 0 100 0 1 554 14682 14129 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 55400 1024 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;