RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA550047" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA550047 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6896394 6896394 PRJNA550047_P_NODE_68226_length_345_cov_12.735294_g66266_i0 PRJNA550047 68226 345 12.735294 43.9367643 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.033   NTclustered gi|2917940703|emb|OZ237559.1| 6108 g66266 i0 94.286 0.101449275362319 35 1 10 1 31 65 16590595 16590628 Anemonia sulcata genome assembly, chromosome: 5 blastn 35 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
11324933 11324933 PRJNA550047_P_NODE_502009_length_230_cov_2.273885_g500036_i0 PRJNA550047 502009 230 2.273885 5.2299355 Actiniaria 6103 Cnidaria other_Eukaryota 86.1 2.02e-12   NTclustered gi|1573349586|gb|MK519645.1| 6118 g500036 i0 88.571 31.5 70 8 30 0 64 133 421 352 Entacmaea quadricolor voucher E_quadricolor_TGEQ9 large subunit ribosomal RNA gene, partial sequence blastn 7245 86.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Entacmaea Entacmaea quadricolor
14542479 14542479 PRJNA550047_P_NODE_203552_length_337_cov_2.837121_g201590_i0 PRJNA550047 203552 337 2.837121 9.56109777 Hydra vulgaris 6087 Cnidaria other_Eukaryota 52.8 0.032   NTclustered gi|2744838618|ref|XM_065787177.1| 6087 g201590 i0 100 0.249258160237389 28 0 8 0 131 158 1302 1275 PREDICTED: Hydra vulgaris uncharacterized LOC136074994 (LOC136074994), transcript variant X3, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
15815861 15815861 PRJNA550047_P_NODE_159693_length_345_cov_4.091912_g157733_i0 PRJNA550047 159693 345 4.091912 14.1170964 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g157733 i0 96.97 0.257971014492754 33 1 10 0 310 342 4577865 4577833 Anemonia sulcata genome assembly, chromosome: 14 blastn 89 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
19639828 19639828 PRJNA550047_P_NODE_201376_length_342_cov_3.877323_g199415_i0 PRJNA550047 201376 342 3.877323 13.26044466 Nematostella vectensis 45351 Cnidaria other_Eukaryota 52.8 0.032   NTclustered gi|1691426760|gb|MK253652.1| 45351 g199415 i0 100 0.409356725146199 28 0 8 0 121 148 12945 12918 Nematostella vectensis cadherin 3 mRNA, complete cds blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
23467260 23467260 PRJNA550047_P_NODE_317359_length_295_cov_3.918919_g315390_i0 PRJNA550047 317359 295 3.918919 11.56081105 Hydra vulgaris 6087 Cnidaria other_Eukaryota 512 1.04e-140   NTclustered gi|2744886754|ref|XM_065809437.1| 6087 g315390 i0 97.966 14.7830508474576 295 6 100 0 1 295 46 340 PREDICTED: Hydra vulgaris uncharacterized LOC136086936 (LOC136086936), mRNA blastn 4361 512 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
23471038 23471038 PRJNA550047_P_NODE_74279_length_345_cov_11.602941_g72319_i0 PRJNA550047 74279 345 11.602941 40.03014645 Umbellula sp. 2 RH-2019 2598118 Cnidaria other_Eukaryota 196 1.43e-45   NTclustered gi|2160785911|gb|OL741705.1| 2598118 g72319 i0 91.034 46.3159420289855 145 13 42 0 197 341 4944 4800 Umbellula sp. NMS.Z.2019.25.13 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15979 196 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Umbellulidae Umbellula Umbellula sp. 2 RH-2019
24745059 24745059 PRJNA550047_P_NODE_94160_length_345_cov_9.007353_g92200_i0 PRJNA550047 94160 345 9.007353 31.07536785 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 89.8 2.49e-13   NTclustered gi|2519013169|ref|XM_057457998.1| 13093 g92200 i0 89.855 4.0463768115942 69 7 20 0 277 345 301 369 PREDICTED: Hydractinia symbiolongicarpus polyubiquitin-C (LOC130655264), mRNA blastn 1396 89.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;