RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA550047" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA550047 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1792205 1792205 PRJNA550047_P_NODE_450382_length_247_cov_3.752874_g448410_i0 PRJNA550047 450382 247 3.752874 9.26959878 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 342 1.1799999999999997e-89   NTclustered gi|2874253811|emb|OY969795.1| 464461 g448410 i0 91.566 116.133603238866 249 19 100 2 1 247 2059175 2059423 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 28685 342 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
1793819 1793819 PRJNA550047_P_NODE_584162_length_202_cov_23.100775_g582189_i0 PRJNA550047 584162 202 23.100775 46.6635655 Candidatus Protochlamydia naegleriophila 389348 Bacteria Bacteria 202 1.6499999999999998e-47   NTclustered gi|971146634|emb|LN879502.1| 389348 g582189 i0 84.878 56.2425742574257 205 26 99 5 1 201 1250186 1250389 Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK blastn 11361 202 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia naegleriophila
5622026 5622026 PRJNA550047_P_NODE_585485_length_202_cov_11.604651_g583512_i0 PRJNA550047 585485 202 11.604651 23.44139502 Candidatus Neptunichlamydia sp. REUL1 3064277 Bacteria Bacteria 171 4.65e-38   NTclustered gi|2578658231|emb|OY735137.1| 3064277 g583512 i0 86.076 1.54455445544554 158 22 78 0 45 202 1157331 1157174 Candidatus Neptunochlamydia sp. REUL1 isolate 46185 genome assembly, chromosome: 4 blastn 312 171 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Neptunichlamydia Candidatus Neptunichlamydia sp. REUL1
13272725 13272725 PRJNA550047_P_NODE_81631_length_345_cov_10.481618_g79671_i0 PRJNA550047 81631 345 10.481618 36.1615821 Candidatus Rhabdochlamydia oedothoracis 2720720 Bacteria Bacteria 217 1.09e-51   NTclustered gi|2076407543|gb|CP075587.1| 2720720 g79671 i0 92.667 0.434782608695652 150 11 43 0 1 150 1452606 1452457 Candidatus Rhabdochlamydia oedothoracis isolate W744xW776 chromosome, complete genome blastn 150 217 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia oedothoracis
20915364 20915364 PRJNA550047_P_NODE_176857_length_345_cov_2.852941_g174897_i0 PRJNA550047 176857 345 2.852941 9.84264645 Chlamydiales bacterium BSEPT1 3097555 Bacteria Bacteria 174 6.68e-39   NTclustered gi|2783367630|emb|OZ156466.1| 3097555 g174897 i0 88 2.09855072463768 150 15 43 3 1 149 285031 285178 Chlamydiales bacterium BSEPT1 isolate 488b1680-3485-4b59-b0c6-665df4973624 genome assembly, chromosome: 1 blastn 724 174 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium BSEPT1
22190686 22190686 PRJNA550047_P_NODE_229538_length_301_cov_6.486842_g227569_i0 PRJNA550047 229538 301 6.486842 19.52539442 Candidatus Rhabdochlamydia porcellionis 225148 Bacteria Bacteria 372 1.89e-98   NTclustered gi|2082223669|gb|CP075585.1| 225148 g227569 i0 88.715 2.09634551495017 319 17 99 7 2 301 1064829 1064511 Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome blastn 631 372 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia porcellionis
23469216 23469216 PRJNA550047_P_NODE_471219_length_240_cov_7.814371_g469246_i0 PRJNA550047 471219 240 7.814371 18.7544904 Candidatus Rhabdochlamydia porcellionis 225148 Bacteria Bacteria 255 1.53e-63   NTclustered gi|2082223669|gb|CP075585.1| 225148 g469246 i0 85.892 1.00416666666667 241 32 100 2 1 240 285846 286085 Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome blastn 241 255 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia porcellionis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;