RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA550047" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA550047 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5616202 5616202 PRJNA550047_P_NODE_105625_length_345_cov_7.937500_g103665_i0 PRJNA550047 105625 345 7.9375 27.384375 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 143 1.88e-29   NTclustered gi|2575803879|emb|OY729511.1| 2838779 g103665 i0 85.821 11.9333333333333 134 19 39 0 14 147 1323976 1324109 MAG: Candidatus Binatia bacterium isolate 9e32f69c-91e7-4ea3-9a30-d9bf58b5a9ec genome assembly, chromosome: 1 blastn 4117 143 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
8169042 8169042 PRJNA550047_P_NODE_41847_length_368_cov_3.664407_g39892_i0 PRJNA550047 41847 368 3.664407 13.48501776 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 124 7.299999999999998e-24   NTclustered gi|2814788387|emb|OY762897.2| 2838779 g39892 i0 92.135 1.09510869565217 89 6 24 1 1 89 2889854 2889941 MAG: Candidatus Binatia bacterium isolate 08c4157d-86a7-49cc-8b26-f3076a3ae996 genome assembly, chromosome: 1 blastn 403 124 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
19642514 19642514 PRJNA550047_P_NODE_421556_length_257_cov_2.755435_g419584_i0 PRJNA550047 421556 257 2.755435 7.08146795 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 233 7.78e-57   NTclustered gi|2575803556|emb|OY729432.1| 2838779 g419584 i0 85.398 28.988326848249 226 31 88 2 26 250 2792164 2792388 MAG: Candidatus Binatia bacterium isolate b65fbbe8-1638-4b94-9072-1473f084fbf4 genome assembly, chromosome: 1 blastn 7450 233 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;