contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA550047" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3065598 | 3065598 | PRJNA550047_P_NODE_298823_length_297_cov_10.281250_g296854_i0 | PRJNA550047 | 298823 | 297 | 10.28125 | 30.5353125 | uncultured Oligoflexales bacterium | 2735263 | Bacteria | Bacteria | 176 | 1.57e-39 | NTclustered | gi|2531963191|emb|OY282434.1| | 2735263 | g296854 | i0 | 87.662 | 123.097643097643 | 154 | 15 | 51 | 4 | 147 | 297 | 955964 | 956116 | MAG: uncultured Oligoflexales bacterium genome assembly, chromosome: 1 | blastn | 36560 | 176 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | uncultured Oligoflexales bacterium | ||||
| 5618817 | 5618817 | PRJNA550047_P_NODE_323125_length_294_cov_4.194570_g321155_i0 | PRJNA550047 | 323125 | 294 | 4.19457 | 12.3320358 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 215 | 3.29e-51 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g321155 | i0 | 80.496 | 3.58163265306122 | 282 | 53 | 96 | 2 | 12 | 292 | 1044116 | 1043836 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 1053 | 215 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 6225932 | 6225932 | PRJNA550047_P_NODE_590405_length_201_cov_4.992188_g588432_i0 | PRJNA550047 | 590405 | 201 | 4.992188 | 10.03429788 | Bdellovibrio | 958 | Bacteria | Bacteria | 174 | 3.58e-39 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g588432 | i0 | 83.871 | 76.4676616915423 | 186 | 26 | 92 | 4 | 1 | 184 | 3058838 | 3059021 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 15370 | 174 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 8775244 | 8775244 | PRJNA550047_P_NODE_598607_length_198_cov_12.920000_g596634_i0 | PRJNA550047 | 598607 | 198 | 12.92 | 25.5816 | Peredibacter | 263370 | Bacteria | Bacteria | 348 | 1.95e-91 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g596634 | i0 | 98.477 | 96.8434343434343 | 197 | 3 | 99 | 0 | 1 | 197 | 512880 | 513076 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 19175 | 348 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 11992778 | 11992778 | PRJNA550047_P_NODE_231830_length_301_cov_5.460526_g229861_i0 | PRJNA550047 | 231830 | 301 | 5.460526 | 16.43618326 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 134 | 9.72e-27 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g229861 | i0 | 87.395 | 0.395348837209302 | 119 | 12 | 39 | 3 | 1 | 118 | 3251757 | 3251641 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 119 | 134 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 15815285 | 15815285 | PRJNA550047_P_NODE_111453_length_345_cov_7.444853_g109493_i0 | PRJNA550047 | 111453 | 345 | 7.444853 | 25.68474285 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 113 | 1.48e-20 | NTclustered | gi|2800914199|gb|CP168971.1| | 959 | g109493 | i0 | 81.618 | 0.666666666666667 | 136 | 25 | 39 | 0 | 13 | 148 | 2941147 | 2941282 | Bdellovibrio bacteriovorus strain Bd16 chromosome, complete genome | blastn | 230 | 113 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 15817649 | 15817649 | PRJNA550047_P_NODE_310493_length_296_cov_4.049327_g308524_i0 | PRJNA550047 | 310493 | 296 | 4.049327 | 11.98600792 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 150 | 9.469999999999999e-32 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g308524 | i0 | 92.523 | 0.722972972972973 | 107 | 5 | 35 | 3 | 15 | 118 | 3401396 | 3401502 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 214 | 150 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 17096465 | 17096465 | PRJNA550047_P_NODE_93934_length_345_cov_9.033088_g91974_i0 | PRJNA550047 | 93934 | 345 | 9.033088 | 31.1641536 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 128 | 5.27e-25 | NTclustered | gi|469926873|gb|CP003538.1| | 349215 | g91974 | i0 | 83.453 | 11.3536231884058 | 139 | 21 | 40 | 2 | 198 | 335 | 1068445 | 1068308 | Micavibrio aeruginosavorus EPB, complete genome | blastn | 3917 | 128 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 18367622 | 18367622 | PRJNA550047_P_NODE_399675_length_265_cov_6.947917_g397703_i0 | PRJNA550047 | 399675 | 265 | 6.947917 | 18.41198005 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 309 | 1.3e-79 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g397703 | i0 | 87.879 | 1.97358490566038 | 264 | 30 | 99 | 2 | 3 | 265 | 92568 | 92306 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 523 | 309 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 20918031 | 20918031 | PRJNA550047_P_NODE_396157_length_266_cov_12.031088_g394185_i0 | PRJNA550047 | 396157 | 266 | 12.031088 | 32.00269408 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 464 | 2.64e-126 | NTclustered | gi|469926873|gb|CP003538.1| | 349215 | g394185 | i0 | 98.12 | 1 | 266 | 5 | 100 | 0 | 1 | 266 | 788335 | 788070 | Micavibrio aeruginosavorus EPB, complete genome | blastn | 266 | 464 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 21522694 | 21522694 | PRJNA550047_P_NODE_259237_length_300_cov_5.436123_g257268_i0 | PRJNA550047 | 259237 | 300 | 5.436123 | 16.308369 | Bdellovibrio | 958 | Bacteria | Bacteria | 97.1 | 1.27e-15 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g257268 | i0 | 90.411 | 0.486666666666667 | 73 | 7 | 24 | 0 | 221 | 293 | 1181072 | 1181144 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 146 | 97.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 22191489 | 22191489 | PRJNA550047_P_NODE_296498_length_297_cov_15.785714_g294529_i0 | PRJNA550047 | 296498 | 297 | 15.785714 | 46.88357058 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 119 | 2.68e-22 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g294529 | i0 | 94.737 | 27.5387205387205 | 76 | 4 | 26 | 0 | 222 | 297 | 61783 | 61858 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 8179 | 119 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 24074068 | 24074068 | PRJNA550047_P_NODE_554419_length_212_cov_8.892086_g552446_i0 | PRJNA550047 | 554419 | 212 | 8.892086 | 18.85122232 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 239 | 1.33e-58 | NTclustered | gi|1950812799|gb|CP066681.1| | 349221 | g552446 | i0 | 87.5 | 180.278301886792 | 208 | 24 | 98 | 2 | 6 | 212 | 658671 | 658465 | Micavibrio aeruginosavorus isolate NC_groundwater_70_Ag_B-0.1um_54_66 chromosome | blastn | 38219 | 239 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 24743504 | 24743504 | PRJNA550047_P_NODE_514000_length_226_cov_5.143791_g512027_i0 | PRJNA550047 | 514000 | 226 | 5.143791 | 11.62496766 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 372 | 1.36e-98 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g512027 | i0 | 96.444 | 11.5176991150442 | 225 | 8 | 99 | 0 | 2 | 226 | 512412 | 512188 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 2603 | 372 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 25347767 | 25347767 | PRJNA550047_P_NODE_415520_length_259_cov_6.166667_g413548_i0 | PRJNA550047 | 415520 | 259 | 6.166667 | 15.97166753 | Bdellovibrio | 958 | Bacteria | Bacteria | 195 | 3.7e-45 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g413548 | i0 | 88.485 | 3.95752895752896 | 165 | 14 | 63 | 5 | 94 | 256 | 2018744 | 2018905 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 1025 | 195 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;