RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA549880" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA549880 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6223369 6223369 PRJNA549880_P_NODE_8465_length_278_cov_1.785366_g8372_i0 PRJNA549880 8465 278 1.785366 4.96331748 Erythrobasidium 5413 Fungi Fungi 505 1.63e-138   NTclustered gi|6782424|gb|AF131058.1| 5414 g8372 i0 99.638 98.3812949640288 276 1 99 0 3 278 304 29 Erythrobasidium hasegawianum strain JCM 1545 large subunit ribosomal RNA gene, partial sequence blastn 27350 505 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
6889533 6889533 PRJNA549880_P_NODE_13046_length_246_cov_0.890173_g12953_i0 PRJNA549880 13046 246 0.890173 2.18982558 Malassezia restricta 76775 Fungi Fungi 296 9.3e-76   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g12953 i0 98.235 69.6951219512195 170 2 69 1 1 170 3041 3209 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 17145 296 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6889667 6889667 PRJNA549880_P_NODE_5126_length_340_cov_1.205993_g5033_i0 PRJNA549880 5126 340 1.205993 4.1003762 Tilletiopsis washingtonensis 58919 Fungi Fungi 196 1.4e-45   NTclustered gi|1423576474|ref|XM_025742275.1| 58919 g5033 i0 85.87 14.8117647058824 184 26 54 0 81 264 85 268 Tilletiopsis washingtonensis putative 40S ribosomal protein S27 (FA09DRAFT_329678), mRNA blastn 5036 196 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
9440288 9440288 PRJNA549880_P_NODE_4108_length_370_cov_3.225589_g4015_i0 PRJNA549880 4108 370 3.225589 11.9346793 Malassezia restricta 76775 Fungi Fungi 676 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g4015 i0 99.73 106.197297297297 370 0 100 1 1 370 1875 1507 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 39293 676 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13265653 13265653 PRJNA549880_P_NODE_11891_length_248_cov_0.880000_g11798_i0 PRJNA549880 11891 248 0.88 2.1824 Dioszegia hungarica 4972 Fungi Fungi 279 9.45e-71   NTclustered gi|2432175759|ref|XR_008288897.1| 4972 g11798 i0 87.302 146.685483870968 252 22 100 8 1 248 3055 3300 Dioszegia hungarica 25S ribosomal RNA (MKK02DRAFT_277614), rRNA blastn 36378 279 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
15814758 15814758 PRJNA549880_P_NODE_5493_length_332_cov_1.185328_g5400_i0 PRJNA549880 5493 332 1.185328 3.93528896 Lentinus tigrinus 5365 Fungi Fungi 204 8.159999999999998e-48   NTclustered gi|2797420667|ref|XM_067684631.1| 1328758 g5400 i0 81.369 60.2560240963855 263 37 78 9 1 260 275 22 Lentinus tigrinus ALCF2SS1-7 40S ribosomal protein uS5 (L226DRAFT_572002), partial mRNA blastn 20005 204 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Lentinus Lentinus tigrinus
18363371 18363371 PRJNA549880_P_NODE_12015_length_248_cov_0.880000_g11922_i0 PRJNA549880 12015 248 0.88 2.1824 Cystobasidium laryngis 105772 Fungi Fungi 398 2.5e-106   NTclustered gi|1358186635|gb|MH047192.1| 105772 g11922 i0 95.918 144.899193548387 245 10 99 0 4 248 3904 3660 Cystobasidium laryngis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 35935 398 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium laryngis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;