contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA549880" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3062937 | 3062937 | PRJNA549880_P_NODE_9103_length_269_cov_1.229592_g9010_i0 | PRJNA549880 | 9103 | 269 | 1.229592 | 3.30760248 | Muribaculaceae bacterium MF13079 | 2767078 | Bacteria | Bacteria | 185 | 2.3299999999999993e-42 | NTclustered | gi|2320761719|gb|CP061009.1| | 2767078 | g9010 | i0 | 80.478 | 2.30855018587361 | 251 | 41 | 92 | 8 | 6 | 252 | 286363 | 286117 | Muribaculaceae bacterium MF13079 chromosome, complete genome | blastn | 621 | 185 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Muribaculaceae | Muribaculaceae bacterium MF13079 | ||
| 4947722 | 4947722 | PRJNA549880_P_NODE_12584_length_247_cov_0.885057_g12491_i0 | PRJNA549880 | 12584 | 247 | 0.885057 | 2.18609079 | Hymenobacteraceae | 1853232 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|27497649|gb|AY167829.1| | 217083 | g12491 | i0 | 100 | 107.008097165992 | 247 | 0 | 100 | 0 | 1 | 247 | 215 | 461 | Hymenobacter sp. SAFR-033 16S ribosomal RNA gene, partial sequence | blastn | 26431 | 457 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter sp. SAFR-033 | |
| 4947729 | 4947729 | PRJNA549880_P_NODE_13164_length_246_cov_0.890173_g13071_i0 | PRJNA549880 | 13164 | 246 | 0.890173 | 2.18982558 | Chryseobacterium | 59732 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|1966888383|gb|CP068486.1| | 250 | g13071 | i0 | 99.593 | 96.9024390243902 | 246 | 1 | 100 | 0 | 1 | 246 | 2961765 | 2962010 | Chryseobacterium gleum strain FDAARGOS_1103 chromosome | blastn | 23838 | 449 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium gleum | |
| 5615630 | 5615630 | PRJNA549880_P_NODE_12545_length_247_cov_0.885057_g12452_i0 | PRJNA549880 | 12545 | 247 | 0.885057 | 2.18609079 | Chryseobacterium sp. M5 | 3379128 | Bacteria | Bacteria | 300 | 7.22e-77 | NTclustered | gi|2853920187|gb|CP173626.1| | 3379128 | g12452 | i0 | 88.664 | 8.02024291497976 | 247 | 27 | 99 | 1 | 1 | 246 | 3556333 | 3556087 | Chryseobacterium sp. M5 chromosome, complete genome | blastn | 1981 | 300 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium sp. M5 | |
| 9440239 | 9440239 | PRJNA549880_P_NODE_1868_length_523_cov_2.691111_g1775_i0 | PRJNA549880 | 1868 | 523 | 2.691111 | 14.07451053 | Pontibacter akesuensis | 388950 | Bacteria | Bacteria | 878 | 0 | NTclustered | gi|1015602746|gb|CP014766.1| | 388950 | g1775 | i0 | 96.941 | 293.286806883365 | 523 | 16 | 100 | 0 | 1 | 523 | 1433637 | 1433115 | Pontibacter akesuensis strain AKS 1T, complete genome | blastn | 153389 | 878 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Pontibacter | Pontibacter akesuensis | |
| 13265639 | 13265639 | PRJNA549880_P_NODE_11151_length_250_cov_0.870056_g11058_i0 | PRJNA549880 | 11151 | 250 | 0.870056 | 2.17514 | Sphingobacterium spiritivorum | 258 | Bacteria | Bacteria | 374 | 4.2499999999999986e-99 | NTclustered | gi|1958211526|gb|CP068082.1| | 258 | g11058 | i0 | 93.6 | 3 | 250 | 16 | 100 | 0 | 1 | 250 | 2149015 | 2149264 | Sphingobacterium spiritivorum strain FDAARGOS_1146 chromosome, complete genome | blastn | 750 | 374 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium spiritivorum | |
| 13265911 | 13265911 | PRJNA549880_P_NODE_9431_length_264_cov_1.612565_g9338_i0 | PRJNA549880 | 9431 | 264 | 1.612565 | 4.2571716 | Pontibacter russatus | 2694929 | Bacteria | Bacteria | 405 | 1.61e-108 | NTclustered | gi|1802158094|gb|CP047984.1| | 2694929 | g9338 | i0 | 94.361 | 241.223484848485 | 266 | 11 | 100 | 4 | 1 | 264 | 1999059 | 1998796 | Pontibacter russatus strain BT326 chromosome, complete genome | blastn | 63683 | 405 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Pontibacter | Pontibacter russatus | |
| 14540601 | 14540601 | PRJNA549880_P_NODE_10712_length_251_cov_0.865169_g10619_i0 | PRJNA549880 | 10712 | 251 | 0.865169 | 2.17157419 | Aquimarina sp. TRL1 | 2736252 | Bacteria | Bacteria | 89.8 | 1.73e-13 | NTclustered | gi|1860281542|gb|CP053590.1| | 2736252 | g10619 | i0 | 89.041 | 1.09163346613546 | 73 | 6 | 29 | 2 | 76 | 147 | 5284046 | 5283975 | Aquimarina sp. TRL1 chromosome, complete genome | blastn | 274 | 89.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Aquimarina | Aquimarina sp. TRL1 | |
| 14540788 | 14540788 | PRJNA549880_P_NODE_5392_length_334_cov_1.869732_g5299_i0 | PRJNA549880 | 5392 | 334 | 1.869732 | 6.24490488 | Prevotella intermedia | 28131 | Bacteria | Bacteria | 562 | 1.18e-155 | NTclustered | gi|1276670087|gb|CP024728.1| | 28131 | g5299 | i0 | 97.015 | 260.559880239521 | 335 | 9 | 100 | 1 | 1 | 334 | 274193 | 273859 | Prevotella intermedia strain KCOM 1949 chromosome 2, complete sequence | blastn | 87027 | 562 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella intermedia | |
| 15814829 | 15814829 | PRJNA549880_P_NODE_9153_length_268_cov_1.553846_g9060_i0 | PRJNA549880 | 9153 | 268 | 1.553846 | 4.16430728 | Leadbetterella byssophila | 316068 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|311905355|gb|CP002305.1| | 649349 | g9060 | i0 | 100 | 0.111940298507463 | 30 | 0 | 11 | 0 | 164 | 193 | 960711 | 960740 | Leadbetterella byssophila DSM 17132, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Leadbetterellaceae | Leadbetterella | Leadbetterella byssophila | |
| 18971128 | 18971128 | PRJNA549880_P_NODE_15235_length_242_cov_0.911243_g15142_i0 | PRJNA549880 | 15235 | 242 | 0.911243 | 2.20520806 | Bacteroidota | 976 | Bacteria | Bacteria | 63.9 | 1.01e-5 | NTclustered | gi|1717444187|gb|CP031708.1| | 332999 | g15142 | i0 | 100 | 2.62809917355372 | 34 | 0 | 14 | 0 | 177 | 210 | 4925171 | 4925138 | Pedobacter suwonensis strain Fj_001 chromosome, complete genome | blastn | 636 | 63.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter suwonensis | |
| 19638061 | 19638061 | PRJNA549880_P_NODE_12976_length_246_cov_0.890173_g12883_i0 | PRJNA549880 | 12976 | 246 | 0.890173 | 2.18982558 | Bacteroidales bacterium SW299 | 2510306 | Bacteria | Bacteria | 281 | 2.6000000000000007e-71 | NTclustered | gi|2729058721|emb|OZ007021.1| | 2510306 | g12883 | i0 | 87.5 | 327.715447154472 | 248 | 26 | 100 | 5 | 1 | 246 | 3143072 | 3142828 | MAG: Bacteroidales bacterium SW299 isolate 6755_HET_CTRL_contig_977_metaflye_circ MAG genome assembly, chromosome: 1 | blastn | 80618 | 281 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium SW299 | |||
| 21521668 | 21521668 | PRJNA549880_P_NODE_13637_length_245_cov_0.895349_g13544_i0 | PRJNA549880 | 13637 | 245 | 0.895349 | 2.19360505 | Chryseobacterium | 59732 | Bacteria | Bacteria | 372 | 1.49e-98 | NTclustered | gi|1494289966|gb|CP033070.1| | 2478663 | g13544 | i0 | 94.262 | 93.734693877551 | 244 | 13 | 99 | 1 | 2 | 245 | 1666260 | 1666502 | Chryseobacterium sp. 3008163 chromosome, complete genome | blastn | 22965 | 375 | 0.992 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium sp. 3008163 | |
| 22188691 | 22188691 | PRJNA549880_P_NODE_14058_length_244_cov_0.900585_g13965_i0 | PRJNA549880 | 14058 | 244 | 0.900585 | 2.1974274 | Flavobacterium sp. KACC 22758 | 3025667 | Bacteria | Bacteria | 274 | 4.31e-69 | NTclustered | gi|2446139215|gb|CP117878.1| | 3025667 | g13965 | i0 | 86.885 | 101.393442622951 | 244 | 32 | 100 | 0 | 1 | 244 | 164227 | 163984 | Flavobacterium sp. KACC 22758 chromosome, complete genome | blastn | 24740 | 274 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. KACC 22758 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;