RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA546018" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA546018 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5615247 5615247 PRJNA546018_S_NODE_7425_length_652_cov_4.160745_g7127_i0 PRJNA546018 7425 652 4.160745 27.1280574 Phycomyces blakesleeanus 4837 Fungi Fungi 453 1.52e-122   NTclustered gi|1069946558|ref|XM_018429454.1| 763407 g7127 i0 82.718 77.2883435582822 515 84 79 5 22 535 504 1014 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 50392 453 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
6888888 6888888 PRJNA546018_S_NODE_48326_length_218_cov_5.929936_g48001_i0 PRJNA546018 48326 218 5.929936 12.92726048 Phycomyces blakesleeanus 4837 Fungi Fungi 139 1.44e-28   NTclustered gi|82398466|gb|DQ273800.1| 4837 g48001 i0 87.705 56.3394495412844 122 12 56 3 7 127 1826 1707 Phycomyces blakesleeanus isolate AFTOL-ID 184 28S ribosomal RNA gene, partial sequence blastn 12282 139 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
11322452 11322452 PRJNA546018_S_NODE_6629_length_698_cov_7.050235_g6346_i0 PRJNA546018 6629 698 7.050235 49.2106403 Fungi 4751 Fungi Fungi 294 1.05e-74   NTclustered gi|2323799184|ref|XM_051552585.1| 101098 g6346 i0 82.727 9.0487106017192 330 57 47 0 207 536 330 1 Gamsiella multidivaricata uncharacterized protein (BC939DRAFT_401053), partial mRNA blastn 6316 294 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
13264713 13264713 PRJNA546018_S_NODE_29151_length_291_cov_10.947826_g28826_i0 PRJNA546018 29151 291 10.947826 31.85817366 Glomus sp. Tf 2-16 262042 Fungi Fungi 460 3.78e-125   NTclustered gi|41353938|gb|AY522919.1| 262042 g28826 i0 95.189 49.1718213058419 291 14 100 0 1 291 306 16 Glomus sp. Tf 2-16 26S ribosomal RNA gene, partial sequence blastn 14309 460 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Glomus Glomus sp. Tf 2-16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;