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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA546018" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA546018 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4337619 4337619 PRJNA546018_S_NODE_12584_length_477_cov_2.012019_g12260_i0 PRJNA546018 12584 477 2.012019 9.59733063 Blastocladiella emersonii 4808 Fungi Fungi 191 9.43e-44   NTclustered gi|209427640|ref|NC_011360.1| 4808 g12260 i0 96.522 22.5932914046122 115 4 51 0 134 248 32220 32334 Blastocladiella emersonii mitochondrion, complete genome blastn 10777 191 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
4338389 4338389 PRJNA546018_S_NODE_60704_length_184_cov_4.975610_g60379_i0 PRJNA546018 60704 184 4.97561 9.1551224 Blastocladiella emersonii 4808 Fungi Fungi 135 1.51e-27   NTclustered gi|209427640|ref|NC_011360.1| 4808 g60379 i0 98.684 10.4347826086957 76 1 41 0 91 166 14667 14592 Blastocladiella emersonii mitochondrion, complete genome blastn 1920 135 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
5614476 5614476 PRJNA546018_S_NODE_15125_length_426_cov_27.841096_g14800_i0 PRJNA546018 15125 426 27.841096 118.60306896 Catenaria sp. 2420186 Fungi Fungi 497 4.39e-136   NTclustered gi|1866582684|gb|MT730859.1| 2420186 g14800 i0 87.85 85.6643192488263 428 46 100 5 1 426 4071 4494 Catenaria sp. isolate JEL0871 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36493 497 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria sp.
7497362 7497362 PRJNA546018_S_NODE_33826_length_267_cov_3.514563_g33501_i0 PRJNA546018 33826 267 3.514563 9.38388321 Blastocladiales 4805 Fungi Fungi 148 3.0299999999999998e-31   NTclustered gi|2440036|emb|X90411.1| 4808 g33501 i0 94.792 27.8426966292135 96 4 36 1 173 267 841 936 B.emersonii DNA for 28S ribosomal RNA gene blastn 7434 148 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
11989932 11989932 PRJNA546018_S_NODE_43110_length_233_cov_7.424419_g42785_i0 PRJNA546018 43110 233 7.424419 17.29889627 Catenophlyctis variabilis 945688 Fungi Fungi 302 1.88e-77   NTclustered gi|82398236|gb|DQ273780.1| 945688 g42785 i0 90.87 58.3047210300429 230 13 98 5 6 233 2778 2555 Catenophlyctis sp. JEL298 isolate AFTOL-ID 36 28S ribosomal RNA gene, partial sequence blastn 13585 302 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenophlyctis Catenophlyctis variabilis
18362245 18362245 PRJNA546018_S_NODE_14775_length_432_cov_25.994609_g14450_i0 PRJNA546018 14775 432 25.994609 112.29671088 Allomyces arbusculus 64504 Fungi Fungi 342 2.2099999999999998e-89   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g14450 i0 81.609 100.80787037037 435 61 100 16 1 432 1554 1972 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 43549 342 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
22187653 22187653 PRJNA546018_S_NODE_25438_length_315_cov_8.590551_g25113_i0 PRJNA546018 25438 315 8.590551 27.06023565 Blastocladiella sp. 2169676 Fungi Fungi 357 5.58e-94   NTclustered gi|1976519919|gb|MN873040.1| 2169676 g25113 i0 89.51 20.2793650793651 286 24 90 5 8 291 10643 10362 Blastocladiella sp. mitochondrion, complete genome blastn 6388 357 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella sp.
24736797 24736797 PRJNA546018_S_NODE_23940_length_326_cov_75.403774_g23615_i0 PRJNA546018 23940 326 75.403774 245.81630324 Blastocladiella emersonii 4808 Fungi Fungi 296 1.28e-75   NTclustered gi|2440036|emb|X90411.1| 4808 g23615 i0 84.639 45.0368098159509 319 25 97 17 10 326 2425 2129 B.emersonii DNA for 28S ribosomal RNA gene blastn 14682 296 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
24737215 24737215 PRJNA546018_S_NODE_49100_length_216_cov_9.006452_g48775_i0 PRJNA546018 49100 216 9.006452 19.45393632 Catenophlyctis variabilis 945688 Fungi Fungi 189 1.3899999999999996e-43   NTclustered gi|82398236|gb|DQ273780.1| 945688 g48775 i0 83.256 81.3425925925926 215 27 99 7 4 216 768 975 Catenophlyctis sp. JEL298 isolate AFTOL-ID 36 28S ribosomal RNA gene, partial sequence blastn 17570 189 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenophlyctis Catenophlyctis variabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;