contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA543299" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 509603 | 509603 | PRJNA543299_P_NODE_18341_length_175_cov_2.142857_g18184_i0 | PRJNA543299 | 18341 | 175 | 2.142857 | 3.74999975 | Clostridium disporicum | 84024 | Bacteria | Bacteria | 313 | 6.13e-81 | NTclustered | gi|333830419|gb|HM245956.1| | 84024 | g18184 | i0 | 98.857 | 883.068571428571 | 175 | 2 | 100 | 0 | 1 | 175 | 130 | 304 | Clostridium disporicum strain DSM 5521 23S ribosomal RNA gene, partial sequence | blastn | 154537 | 313 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium disporicum | ||
| 1118532 | 1118532 | PRJNA543299_P_NODE_10241_length_233_cov_0.880435_g10084_i0 | PRJNA543299 | 10241 | 233 | 0.880435 | 2.05141355 | Clostridium | 1485 | Bacteria | Bacteria | 342 | 1.0999999999999999e-89 | NTclustered | gi|2869643049|gb|CP175543.1| | 1502 | g10084 | i0 | 93.506 | 904.922746781116 | 231 | 13 | 99 | 1 | 3 | 233 | 211405 | 211633 | Clostridium perfringens strain GZ-3 chromosome, complete genome | blastn | 210847 | 344 | 0.994186046511628 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 3060664 | 3060664 | PRJNA543299_P_NODE_6023_length_299_cov_1.164000_g5867_i0 | PRJNA543299 | 6023 | 299 | 1.164 | 3.48036 | Lysinibacillus fusiformis | 28031 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|2451318646|gb|CP118714.1| | 28031 | g5867 | i0 | 100 | 0.678929765886288 | 29 | 0 | 10 | 0 | 213 | 241 | 780646 | 780618 | Lysinibacillus fusiformis strain G5.M11b chromosome, complete genome | blastn | 203 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Lysinibacillus | Lysinibacillus fusiformis | ||
| 3669943 | 3669943 | PRJNA543299_P_NODE_13743_length_202_cov_1.313725_g13586_i0 | PRJNA543299 | 13743 | 202 | 1.313725 | 2.6537245 | Clostridium | 1485 | Bacteria | Bacteria | 374 | 3.3e-99 | NTclustered | gi|358250948|gb|JN834642.1| | 59620 | g13586 | i0 | 100 | 125.925742574257 | 202 | 0 | 100 | 0 | 1 | 202 | 225 | 24 | Uncultured Clostridium sp. clone 386E14TEAT 16S ribosomal RNA gene, partial sequence | blastn | 25437 | 374 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | uncultured Clostridium sp. | ||
| 6222261 | 6222261 | PRJNA543299_P_NODE_7625_length_268_cov_1.461187_g7468_i0 | PRJNA543299 | 7625 | 268 | 1.461187 | 3.91598116 | Staphylococcus | 1279 | Bacteria | Bacteria | 490 | 4.39e-134 | NTclustered | gi|93463980|gb|DQ472009.1| | 1288 | g7468 | i0 | 99.627 | 515.925373134328 | 268 | 1 | 100 | 0 | 1 | 268 | 383 | 116 | Staphylococcus xylosus strain DSM20267 23S ribosomal RNA gene, partial sequence | blastn | 138268 | 490 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus xylosus | ||
| 7496787 | 7496787 | PRJNA543299_P_NODE_24406_length_163_cov_0.894737_g24249_i0 | PRJNA543299 | 24406 | 163 | 0.894737 | 1.45842131 | Staphylococcus | 1279 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|1714026535|gb|CP031277.1| | 1290 | g24249 | i0 | 100 | 99.8711656441718 | 163 | 0 | 100 | 0 | 1 | 163 | 1558372 | 1558534 | Staphylococcus hominis strain 19A chromosome, complete genome | blastn | 16279 | 302 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 8771663 | 8771663 | PRJNA543299_P_NODE_3887_length_367_cov_0.874214_g3732_i0 | PRJNA543299 | 3887 | 367 | 0.874214 | 3.20836538 | Bacteria | 2 | Bacteria | Bacteria | 667 | 0 | NTclustered | gi|2283119276|gb|CP071933.1| | 1390 | g3732 | i0 | 99.455 | 106.615803814714 | 367 | 2 | 100 | 0 | 1 | 367 | 979 | 1345 | Bacillus amyloliquefaciens strain CAS02 plasmid unnamed, complete sequence | blastn | 39128 | 673 | 0.991084695393759 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus amyloliquefaciens | ||
| 8771664 | 8771664 | PRJNA543299_P_NODE_4527_length_342_cov_1.982935_g4372_i0 | PRJNA543299 | 4527 | 342 | 1.982935 | 6.7816377 | Staphylococcus | 1279 | Bacteria | Bacteria | 604 | 1.979999999999999e-168 | NTclustered | gi|93463980|gb|DQ472009.1| | 1288 | g4372 | i0 | 98.538 | 525.014619883041 | 342 | 5 | 100 | 0 | 1 | 342 | 2028 | 2369 | Staphylococcus xylosus strain DSM20267 23S ribosomal RNA gene, partial sequence | blastn | 179555 | 610 | 0.99016393442623 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus xylosus | ||
| 12597656 | 12597656 | PRJNA543299_P_NODE_8590_length_253_cov_2.941176_g8433_i0 | PRJNA543299 | 8590 | 253 | 2.941176 | 7.44117528 | Streptococcus | 1301 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1578069334|emb|LR216032.1| | 1313 | g8433 | i0 | 100 | 322 | 253 | 0 | 100 | 0 | 1 | 253 | 23246 | 23498 | Streptococcus pneumoniae strain 2245STDY5775874 genome assembly, chromosome: 1 | blastn | 81466 | 468 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae | ||
| 13872502 | 13872502 | PRJNA543299_P_NODE_14751_length_195_cov_2.671233_g14594_i0 | PRJNA543299 | 14751 | 195 | 2.671233 | 5.20890435 | Staphylococcus | 1279 | Bacteria | Bacteria | 353 | 4.12e-93 | NTclustered | gi|93463980|gb|DQ472009.1| | 1288 | g14594 | i0 | 99.487 | 516.989743589744 | 195 | 0 | 100 | 1 | 1 | 195 | 1488 | 1295 | Staphylococcus xylosus strain DSM20267 23S ribosomal RNA gene, partial sequence | blastn | 100813 | 353 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus xylosus | ||
| 17696579 | 17696579 | PRJNA543299_P_NODE_15614_length_190_cov_1.085106_g15457_i0 | PRJNA543299 | 15614 | 190 | 1.085106 | 2.0617014 | Bacillales | 1385 | Bacteria | Bacteria | 346 | 6.690000000000001e-91 | NTclustered | gi|2692800537|gb|CP146065.1| | 1283 | g15457 | i0 | 99.474 | 455.852631578947 | 190 | 1 | 100 | 0 | 1 | 190 | 772780 | 772969 | Staphylococcus haemolyticus strain SPS12 chromosome, complete genome | blastn | 86612 | 346 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 21520693 | 21520693 | PRJNA543299_P_NODE_15557_length_190_cov_1.638298_g15400_i0 | PRJNA543299 | 15557 | 190 | 1.638298 | 3.1127662 | Streptococcus | 1301 | Bacteria | Bacteria | 351 | 1.4399999999999997e-92 | NTclustered | gi|1438634269|gb|CP031248.1| | 1313 | g15400 | i0 | 100 | 325 | 190 | 0 | 100 | 0 | 1 | 190 | 1467457 | 1467646 | Streptococcus pneumoniae strain M26365 chromosome, complete genome | blastn | 61750 | 351 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae | ||
| 22795856 | 22795856 | PRJNA543299_P_NODE_20138_length_167_cov_1.728814_g19981_i0 | PRJNA543299 | 20138 | 167 | 1.728814 | 2.88711938 | root | 1 | Root_unresolved | Root_unresolved | 309 | 7.53e-80 | NTclustered | gi|1851774573|gb|MT585552.1| | 1304 | g19981 | i0 | 100 | 105 | 167 | 0 | 100 | 0 | 1 | 167 | 1089 | 1255 | Streptococcus salivarius strain 868 16S ribosomal RNA gene, partial sequence | blastn | 17535 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 23461918 | 23461918 | PRJNA543299_P_NODE_24719_length_162_cov_1.185841_g24562_i0 | PRJNA543299 | 24719 | 162 | 1.185841 | 1.92106242 | Streptococcus sp. LPB0220 | 2610896 | Bacteria | Bacteria | 217 | 4.5199999999999996e-52 | NTclustered | gi|1752759834|gb|CP044230.1| | 2610896 | g24562 | i0 | 90.798 | 489.858024691358 | 163 | 13 | 100 | 2 | 1 | 162 | 449166 | 449005 | Streptococcus sp. LPB0220 chromosome, complete genome | blastn | 79357 | 217 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. LPB0220 | ||
| 25344980 | 25344980 | PRJNA543299_P_NODE_25500_length_161_cov_1.821429_g25343_i0 | PRJNA543299 | 25500 | 161 | 1.821429 | 2.93250069 | root | 1 | Root_unresolved | Root_unresolved | 298 | 1.56e-76 | NTclustered | gi|289541377|gb|GU395995.1| | 29394 | g25343 | i0 | 100 | 103 | 161 | 0 | 100 | 0 | 1 | 161 | 758 | 598 | Dolosigranulum pigrum strain 33929-06 16S ribosomal RNA gene, partial sequence | blastn | 16583 | 298 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Dolosigranulum | Dolosigranulum pigrum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;