contig_metadata
39 rows where analysis = "blastn", bioproject = "PRJNA543299" and tax_phylum = "Actinomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1118535 | 1118535 | PRJNA543299_P_NODE_18601_length_174_cov_1.632000_g18444_i0 | PRJNA543299 | 18601 | 174 | 1.632 | 2.83968 | Cutibacterium | 1912216 | Bacteria | Bacteria | 322 | 1.01e-83 | NTclustered | gi|1755605466|dbj|AP019664.1| | 1747 | g18444 | i0 | 100 | 53 | 174 | 0 | 100 | 0 | 1 | 174 | 1847764 | 1847937 | Cutibacterium acnes TP-CU389 DNA, complete genome | blastn | 9222 | 322 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 3060607 | 3060607 | PRJNA543299_P_NODE_26143_length_161_cov_0.910714_g25986_i0 | PRJNA543299 | 26143 | 161 | 0.910714 | 1.46624954 | Streptomyces sp. NBC_00525 | 2903660 | Bacteria | Bacteria | 58.4 | 2.87e-4 | NTclustered | gi|2667602711|gb|CP107834.1| | 2903660 | g25986 | i0 | 89.362 | 0.291925465838509 | 47 | 3 | 29 | 2 | 34 | 79 | 3598858 | 3598903 | Streptomyces sp. NBC_00525 chromosome, complete genome | blastn | 47 | 58.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00525 | ||
| 4336404 | 4336404 | PRJNA543299_P_NODE_10724_length_228_cov_0.737430_g10567_i0 | PRJNA543299 | 10724 | 228 | 0.73743 | 1.6813404 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 411 | 2.909999999999999e-110 | NTclustered | gi|2513802487|gb|CP126745.1| | 1747 | g10567 | i0 | 99.123 | 50.859649122807 | 228 | 2 | 100 | 0 | 1 | 228 | 1954058 | 1953831 | Cutibacterium acnes strain W80 chromosome, complete genome | blastn | 11596 | 411 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 4336658 | 4336658 | PRJNA543299_P_NODE_25144_length_162_cov_0.902655_g24987_i0 | PRJNA543299 | 25144 | 162 | 0.902655 | 1.4623011 | Nocardioides panacis | 2849501 | Bacteria | Bacteria | 272 | 9.51e-69 | NTclustered | gi|2058277912|gb|CP077062.1| | 2849501 | g24987 | i0 | 96.914 | 97.8888888888889 | 162 | 5 | 100 | 0 | 1 | 162 | 884735 | 884896 | Nocardioides panacis strain G188 chromosome, complete genome | blastn | 15858 | 272 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides panacis | ||
| 4946810 | 4946810 | PRJNA543299_P_NODE_8824_length_250_cov_1.676617_g8667_i0 | PRJNA543299 | 8824 | 250 | 1.676617 | 4.1915425 | Micrococcales | 85006 | Bacteria | Bacteria | 435 | 1.92e-117 | NTclustered | gi|2894499433|gb|CP178330.1| | 2047 | g8667 | i0 | 98 | 174.004 | 250 | 5 | 100 | 0 | 1 | 250 | 900550 | 900301 | Rothia dentocariosa strain SOSUI028 chromosome, complete genome | blastn | 43501 | 435 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia dentocariosa | ||
| 5613331 | 5613331 | PRJNA543299_P_NODE_15645_length_190_cov_0.794326_g15488_i0 | PRJNA543299 | 15645 | 190 | 0.794326 | 1.5092194 | uncultured Microthrixaceae bacterium | 1798915 | Bacteria | Bacteria | 298 | 1.9e-76 | NTclustered | gi|2874253917|emb|OY970242.1| | 1798915 | g15488 | i0 | 94.819 | 139.247368421053 | 193 | 7 | 100 | 3 | 1 | 190 | 1275707 | 1275515 | MAG: uncultured Microthrixaceae bacterium isolate MFD03066.bin.2.142 genome assembly, chromosome: 1 | blastn | 26457 | 298 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Microthrixaceae | uncultured Microthrixaceae bacterium | |||
| 7496779 | 7496779 | PRJNA543299_P_NODE_14626_length_196_cov_1.727891_g14469_i0 | PRJNA543299 | 14626 | 196 | 1.727891 | 3.38666636 | Aurantimicrobium | 1705353 | Bacteria | Bacteria | 357 | 3.2099999999999996e-94 | NTclustered | gi|1027809705|dbj|AP017457.1| | 708131 | g14469 | i0 | 99.49 | 185.122448979592 | 196 | 1 | 100 | 0 | 1 | 196 | 759370 | 759175 | Aurantimicrobium minutum DNA, complete genome, strain: KNC | blastn | 36284 | 357 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Aurantimicrobium | Aurantimicrobium minutum | ||
| 7496788 | 7496788 | PRJNA543299_P_NODE_25186_length_162_cov_0.902655_g25029_i0 | PRJNA543299 | 25186 | 162 | 0.902655 | 1.4623011 | Corynebacterium | 1716 | Bacteria | Bacteria | 294 | 2.03e-75 | NTclustered | gi|2869817591|gb|CP175775.1| | 1979527 | g25029 | i0 | 99.383 | 49.0061728395062 | 162 | 1 | 100 | 0 | 1 | 162 | 335264 | 335425 | Corynebacterium kefirresidentii strain YSMAA3_1_H1 chromosome, complete genome | blastn | 7939 | 294 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 8162423 | 8162423 | PRJNA543299_P_NODE_22587_length_165_cov_0.879310_g22430_i0 | PRJNA543299 | 22587 | 165 | 0.87931 | 1.4508615 | Microbacterium sp. PM5 | 2014534 | Bacteria | Bacteria | 191 | 2.7999999999999995e-44 | NTclustered | gi|1419380645|gb|CP022162.1| | 2014534 | g22430 | i0 | 87.574 | 1.02424242424242 | 169 | 16 | 100 | 4 | 1 | 165 | 352073 | 352240 | Microbacterium sp. PM5 genome | blastn | 169 | 191 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. PM5 | ||
| 8162536 | 8162536 | PRJNA543299_P_NODE_6207_length_295_cov_1.065041_g6051_i0 | PRJNA543299 | 6207 | 295 | 1.065041 | 3.14187095 | Geodermatophilaceae bacterium NBWT11 | 2596920 | Bacteria | Bacteria | 411 | 3.9199999999999996e-110 | NTclustered | gi|1891431189|gb|CP043652.1| | 2596920 | g6051 | i0 | 94.382 | 239.983050847458 | 267 | 15 | 91 | 0 | 29 | 295 | 2263813 | 2264079 | Geodermatophilaceae bacterium NBWT11 chromosome, complete genome | blastn | 70795 | 411 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Geodermatophilaceae bacterium NBWT11 | |||
| 8771656 | 8771656 | PRJNA543299_P_NODE_21347_length_166_cov_0.871795_g21190_i0 | PRJNA543299 | 21347 | 166 | 0.871795 | 1.4471797 | Cutibacterium | 1912216 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g21190 | i0 | 100 | 53 | 166 | 0 | 100 | 0 | 1 | 166 | 1399398 | 1399233 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 8798 | 307 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8771666 | 8771666 | PRJNA543299_P_NODE_8047_length_261_cov_1.976415_g7890_i0 | PRJNA543299 | 8047 | 261 | 1.976415 | 5.15844315 | Cutibacterium | 1912216 | Bacteria | Bacteria | 483 | 7.12e-132 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g7890 | i0 | 100 | 273.804597701149 | 261 | 0 | 100 | 0 | 1 | 261 | 56848 | 56588 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 71463 | 483 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9437873 | 9437873 | PRJNA543299_P_NODE_21648_length_166_cov_0.871795_g21491_i0 | PRJNA543299 | 21648 | 166 | 0.871795 | 1.4471797 | Kitasatospora cathayae | 3004092 | Bacteria | Bacteria | 71.3 | 3.84e-8 | NTclustered | gi|2425286827|gb|CP115450.1| | 3004092 | g21491 | i0 | 93.617 | 0.283132530120482 | 47 | 3 | 28 | 0 | 76 | 122 | 2655671 | 2655717 | Kitasatospora cathayae strain HUAS 3-15 chromosome, complete genome | blastn | 47 | 71.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora cathayae | ||
| 9437903 | 9437903 | PRJNA543299_P_NODE_23268_length_164_cov_0.886957_g23111_i0 | PRJNA543299 | 23268 | 164 | 0.886957 | 1.45460948 | Gordonia sp. WA4-43 | 2878678 | Bacteria | Bacteria | 287 | 3.45e-73 | NTclustered | gi|2118097956|gb|CP084736.1| | 2878678 | g23111 | i0 | 98.171 | 102.05487804878 | 164 | 3 | 100 | 0 | 1 | 164 | 2363561 | 2363724 | Gordonia sp. WA4-43 chromosome, complete genome | blastn | 16737 | 287 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Gordoniaceae | Gordonia | Gordonia sp. WA4-43 | ||
| 9437994 | 9437994 | PRJNA543299_P_NODE_5008_length_327_cov_1.633094_g4852_i0 | PRJNA543299 | 5008 | 327 | 1.633094 | 5.34021738 | Cutibacterium avidum | 33010 | Bacteria | Bacteria | 518 | 2.5199999999999998e-142 | NTclustered | gi|1059945062|gb|CP016954.1| | 33010 | g4852 | i0 | 95.963 | 290.654434250765 | 322 | 8 | 98 | 4 | 9 | 327 | 22002 | 22321 | Cutibacterium avidum strain DPC 6544, complete genome | blastn | 95044 | 518 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium avidum | ||
| 11988417 | 11988417 | PRJNA543299_P_NODE_23810_length_163_cov_0.894737_g23653_i0 | PRJNA543299 | 23810 | 163 | 0.894737 | 1.45842131 | Mycolicibacterium grossiae | 1552759 | Bacteria | Bacteria | 228 | 2.0999999999999998e-55 | NTclustered | gi|1735426587|gb|CP043474.1| | 1552759 | g23653 | i0 | 91.975 | 142.19018404908 | 162 | 13 | 99 | 0 | 1 | 162 | 4035480 | 4035319 | Mycolicibacterium grossiae strain DSM 104744 chromosome, complete genome | blastn | 23177 | 228 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium grossiae | ||
| 12597647 | 12597647 | PRJNA543299_P_NODE_1570_length_544_cov_2.327273_g1429_i0 | PRJNA543299 | 1570 | 544 | 2.327273 | 12.66036512 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1000 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g1429 | i0 | 99.816 | 268.047794117647 | 544 | 1 | 100 | 0 | 1 | 544 | 55908 | 55365 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 145818 | 1000 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 13872507 | 13872507 | PRJNA543299_P_NODE_25591_length_161_cov_1.330357_g25434_i0 | PRJNA543299 | 25591 | 161 | 1.330357 | 2.14187477 | Micrococcus | 1269 | Bacteria | Bacteria | 276 | 7.29e-70 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g25434 | i0 | 97.516 | 339.142857142857 | 161 | 4 | 100 | 0 | 1 | 161 | 346411 | 346571 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 54602 | 276 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 14538476 | 14538476 | PRJNA543299_P_NODE_25372_length_162_cov_0.893805_g25215_i0 | PRJNA543299 | 25372 | 162 | 0.893805 | 1.4479641 | Leucobacter sp. Psy1 | 2875729 | Bacteria | Bacteria | 150 | 4.65e-32 | NTclustered | gi|2099409849|gb|CP083692.1| | 2875729 | g25215 | i0 | 87.692 | 0.802469135802469 | 130 | 14 | 80 | 2 | 27 | 155 | 1036559 | 1036431 | Leucobacter sp. Psy1 chromosome, complete genome | blastn | 130 | 150 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leucobacter | Leucobacter sp. Psy1 | ||
| 15146703 | 15146703 | PRJNA543299_P_NODE_18452_length_175_cov_1.190476_g18295_i0 | PRJNA543299 | 18452 | 175 | 1.190476 | 2.083333 | Micrococcus | 1269 | Bacteria | Bacteria | 305 | 1.02e-78 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g18295 | i0 | 98.276 | 317.337142857143 | 174 | 3 | 99 | 0 | 1 | 174 | 347420 | 347247 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 55534 | 305 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 15146706 | 15146706 | PRJNA543299_P_NODE_23692_length_163_cov_1.342105_g23535_i0 | PRJNA543299 | 23692 | 163 | 1.342105 | 2.18763115 | Actinomycetes | 1760 | Bacteria | Bacteria | 291 | 2.64e-74 | NTclustered | gi|377823580|emb|HE648128.1| | 1270 | g23535 | i0 | 98.773 | 100 | 163 | 2 | 100 | 0 | 1 | 163 | 175 | 13 | Micrococcus luteus partial 16S rRNA gene, strain C3 11155 | blastn | 16300 | 291 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 15812379 | 15812379 | PRJNA543299_P_NODE_20873_length_167_cov_0.830508_g20716_i0 | PRJNA543299 | 20873 | 167 | 0.830508 | 1.38694836 | Candidatus Aquiluna sp. UB-MaderosW2red | 1855377 | Bacteria | Bacteria | 265 | 1.65e-66 | NTclustered | gi|1081426101|emb|LT627734.1| | 1855377 | g20716 | i0 | 96.835 | 162.604790419162 | 158 | 5 | 95 | 0 | 10 | 167 | 1309766 | 1309923 | Candidatus Aquiluna sp. UB-MaderosW2red genome assembly, chromosome: I | blastn | 27155 | 265 | 1 | Bacteria | Luna-1 subcluster | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Aquiluna | Candidatus Aquiluna sp. UB-MaderosW2red | |
| 15812412 | 15812412 | PRJNA543299_P_NODE_22393_length_165_cov_0.879310_g22236_i0 | PRJNA543299 | 22393 | 165 | 0.87931 | 1.4508615 | Rhodoluna lacicola | 529884 | Bacteria | Bacteria | 239 | 9.87e-59 | NTclustered | gi|649018083|gb|CP007490.1| | 529884 | g22236 | i0 | 92.771 | 2.01212121212121 | 166 | 11 | 100 | 1 | 1 | 165 | 1411076 | 1411241 | Rhodoluna lacicola strain MWH-Ta8 chromosome, complete genome | blastn | 332 | 239 | 1 | Bacteria | Luna-1 subcluster | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Rhodoluna | Rhodoluna lacicola | |
| 17087131 | 17087131 | PRJNA543299_P_NODE_20414_length_167_cov_0.864407_g20257_i0 | PRJNA543299 | 20414 | 167 | 0.864407 | 1.44355969 | Microlunatus sagamiharensis | 546874 | Bacteria | Bacteria | 104 | 3.81e-18 | NTclustered | gi|1086063565|emb|LT629799.1| | 546874 | g20257 | i0 | 86 | 6.36526946107784 | 100 | 10 | 59 | 4 | 64 | 161 | 738435 | 738532 | Friedmanniella sagamiharensis strain DSM 21743 genome assembly, chromosome: I | blastn | 1063 | 104 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Microlunatus | Microlunatus sagamiharensis | ||
| 17696584 | 17696584 | PRJNA543299_P_NODE_22714_length_164_cov_2.321739_g22557_i0 | PRJNA543299 | 22714 | 164 | 2.321739 | 3.80765196 | Cutibacterium | 1912216 | Bacteria | Bacteria | 300 | 4.43e-77 | NTclustered | gi|208972183|gb|FJ222608.1| | 1747 | g22557 | i0 | 100 | 252.579268292683 | 162 | 0 | 99 | 0 | 1 | 162 | 8 | 169 | Propionibacterium acnes strain CCARM9035 23S ribosomal RNA gene, partial sequence | blastn | 41423 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 18361190 | 18361190 | PRJNA543299_P_NODE_22575_length_165_cov_0.879310_g22418_i0 | PRJNA543299 | 22575 | 165 | 0.87931 | 1.4508615 | Aurantimicrobium minutum | 708131 | Bacteria | Bacteria | 180 | 6.07e-41 | NTclustered | gi|1027809705|dbj|AP017457.1| | 708131 | g22418 | i0 | 86.503 | 0.987878787878788 | 163 | 22 | 99 | 0 | 2 | 164 | 1094758 | 1094920 | Aurantimicrobium minutum DNA, complete genome, strain: KNC | blastn | 163 | 180 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Aurantimicrobium | Aurantimicrobium minutum | ||
| 20911597 | 20911597 | PRJNA543299_P_NODE_18437_length_175_cov_1.214286_g18280_i0 | PRJNA543299 | 18437 | 175 | 1.214286 | 2.1250005 | Aquiluna borgnonia | 2499157 | Bacteria | Bacteria | 311 | 2.2e-80 | NTclustered | gi|1850312474|gb|CP054056.1| | 2499157 | g18280 | i0 | 98.851 | 17.7371428571429 | 174 | 2 | 99 | 0 | 2 | 175 | 855922 | 856095 | Aquiluna borgnonia strain 15G-AUS-rot chromosome, complete genome | blastn | 3104 | 311 | 1 | Bacteria | Luna-1 subcluster | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Aquiluna | Aquiluna borgnonia | |
| 20911692 | 20911692 | PRJNA543299_P_NODE_23977_length_163_cov_0.894737_g23820_i0 | PRJNA543299 | 23977 | 163 | 0.894737 | 1.45842131 | uncultured Actinomycetes bacterium | 152507 | Bacteria | Bacteria | 200 | 4.589999999999999e-47 | NTclustered | gi|1764714135|gb|MN565653.1| | 152507 | g23820 | i0 | 89.308 | 137.036809815951 | 159 | 17 | 98 | 0 | 3 | 161 | 272 | 114 | Uncultured actinobacterium clone Jir-CL1-clone68 23S ribosomal RNA gene, partial sequence | blastn | 22337 | 200 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | uncultured Actinomycetes bacterium | |||||
| 20911709 | 20911709 | PRJNA543299_P_NODE_25057_length_162_cov_0.902655_g24900_i0 | PRJNA543299 | 25057 | 162 | 0.902655 | 1.4623011 | Microbacterium enclense | 993073 | Bacteria | Bacteria | 148 | 1.6699999999999999e-31 | NTclustered | gi|2717286595|gb|CP116226.1| | 993073 | g24900 | i0 | 83.648 | 3.16049382716049 | 159 | 25 | 98 | 1 | 5 | 162 | 1770699 | 1770857 | MAG: Microbacterium enclense isolate bin7 chromosome, complete genome | blastn | 512 | 148 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium enclense | ||
| 21520696 | 21520696 | PRJNA543299_P_NODE_19597_length_169_cov_3.433333_g19440_i0 | PRJNA543299 | 19597 | 169 | 3.433333 | 5.80233277 | root | 1 | Root_unresolved | Root_unresolved | 313 | 5.859999999999999e-81 | NTclustered | gi|50082565|gb|AY642042.1| | 1747 | g19440 | i0 | 100 | 103 | 169 | 0 | 100 | 0 | 1 | 169 | 1417 | 1249 | Propionibacterium acnes isolate L1958 16S ribosomal RNA gene, partial sequence | blastn | 17407 | 313 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 21520709 | 21520709 | PRJNA543299_P_NODE_6337_length_292_cov_2.320988_g6181_i0 | PRJNA543299 | 6337 | 292 | 2.320988 | 6.77728496 | Cutibacterium | 1912216 | Bacteria | Bacteria | 510 | 3.71e-140 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g6181 | i0 | 98.282 | 267.119863013699 | 291 | 5 | 99 | 0 | 1 | 291 | 56277 | 56567 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 77999 | 510 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22186352 | 22186352 | PRJNA543299_P_NODE_17618_length_179_cov_1.276923_g17461_i0 | PRJNA543299 | 17618 | 179 | 1.276923 | 2.28569217 | Frankia casuarinae | 106370 | Bacteria | Bacteria | 128 | 2.45e-25 | NTclustered | gi|86565586|gb|CP000249.1| | 106370 | g17461 | i0 | 94.048 | 55.4692737430168 | 84 | 5 | 47 | 0 | 96 | 179 | 3749613 | 3749530 | Frankia casuarinae strain CcI3, complete genome | blastn | 9929 | 128 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Frankiales | Frankiaceae | Frankia | Frankia casuarinae | ||
| 22186422 | 22186422 | PRJNA543299_P_NODE_21658_length_166_cov_0.871795_g21501_i0 | PRJNA543299 | 21658 | 166 | 0.871795 | 1.4471797 | Ilumatobacter coccineus | 467094 | Bacteria | Bacteria | 99 | 1.76e-16 | NTclustered | gi|464097432|dbj|AP012057.1| | 1313172 | g21501 | i0 | 80.62 | 2.33132530120482 | 129 | 23 | 77 | 2 | 37 | 164 | 3675487 | 3675360 | Ilumatobacter coccineus YM16-304 DNA, complete genome | blastn | 387 | 99 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Ilumatobacteraceae | Ilumatobacter | Ilumatobacter coccineus | ||
| 22795860 | 22795860 | PRJNA543299_P_NODE_22098_length_165_cov_0.879310_g21941_i0 | PRJNA543299 | 22098 | 165 | 0.87931 | 1.4508615 | Rhodococcus | 1827 | Bacteria | Bacteria | 300 | 4.46e-77 | NTclustered | gi|2258906618|dbj|AP018733.1| | 1833 | g21941 | i0 | 99.394 | 49 | 165 | 1 | 100 | 0 | 1 | 165 | 4160683 | 4160847 | Rhodococcus erythropolis JCM 2895 DNA, complete genome | blastn | 8085 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus erythropolis | ||
| 23461723 | 23461723 | PRJNA543299_P_NODE_13339_length_205_cov_1.198718_g13182_i0 | PRJNA543299 | 13339 | 205 | 1.198718 | 2.4573719 | Microbacterium sp. LBN7 | 3129773 | Bacteria | Bacteria | 300 | 5.79e-77 | NTclustered | gi|2708577831|gb|CP147856.1| | 3129773 | g13182 | i0 | 95.699 | 161.707317073171 | 186 | 8 | 91 | 0 | 1 | 186 | 3233998 | 3233813 | Microbacterium sp. LBN7 chromosome | blastn | 33150 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. LBN7 | ||
| 25344964 | 25344964 | PRJNA543299_P_NODE_12660_length_210_cov_2.000000_g12503_i0 | PRJNA543299 | 12660 | 210 | 2 | 4.2 | Nocardiaceae | 85025 | Bacteria | Bacteria | 353 | 4.51e-93 | NTclustered | gi|1273298528|gb|CP024315.1| | 1830 | g12503 | i0 | 97.129 | 370.166666666667 | 209 | 6 | 99 | 0 | 2 | 210 | 879427 | 879219 | Rhodococcus ruber strain P14 chromosome, complete genome | blastn | 77735 | 355 | 0.994366197183099 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus ruber | ||
| 25344968 | 25344968 | PRJNA543299_P_NODE_17620_length_179_cov_1.215385_g17463_i0 | PRJNA543299 | 17620 | 179 | 1.215385 | 2.17553915 | Actinomycetes | 1760 | Bacteria | Bacteria | 320 | 3.76e-83 | NTclustered | gi|674655357|gb|KJ812376.1| | 1892 | g17463 | i0 | 98.883 | 110 | 179 | 2 | 100 | 0 | 1 | 179 | 1200 | 1022 | Streptomyces anulatus strain OAct522 16S ribosomal RNA gene, partial sequence | blastn | 19690 | 320 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces anulatus | ||
| 25344970 | 25344970 | PRJNA543299_P_NODE_21260_length_166_cov_0.871795_g21103_i0 | PRJNA543299 | 21260 | 166 | 0.871795 | 1.4471797 | Clavibacter | 1573 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2842479528|gb|CP159947.1| | 28447 | g21103 | i0 | 96.774 | 2.96987951807229 | 31 | 1 | 19 | 0 | 96 | 126 | 743478 | 743508 | Clavibacter michiganensis strain CMS1 chromosome | blastn | 493 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Clavibacter | Clavibacter michiganensis | ||
| 25344973 | 25344973 | PRJNA543299_P_NODE_2240_length_472_cov_0.964539_g2095_i0 | PRJNA543299 | 2240 | 472 | 0.964539 | 4.55262408 | Corynebacterium | 1716 | Bacteria | Bacteria | 691 | 0 | NTclustered | gi|2869804070|gb|CP175770.1| | 38304 | g2095 | i0 | 93.249 | 359.900423728814 | 474 | 25 | 99 | 7 | 1 | 470 | 990431 | 990901 | Corynebacterium tuberculostearicum strain YSMAA5_1_B12 chromosome, complete genome | blastn | 169873 | 691 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;