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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA543299" and tax_kingdom = "Fungi"

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tax_phylum 3

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA543299 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2394115 2394115 PRJNA543299_P_NODE_24902_length_162_cov_0.902655_g24745_i0 PRJNA543299 24902 162 0.902655 1.4623011 Tremellales 5234 Fungi Fungi 294 2.03e-75   NTclustered gi|1850780|dbj|D78327.1| 57471 g24745 i0 99.383 99.9753086419753 162 1 100 0 1 162 760 921 Bullera hannae gene for small subunit ribosomal RNA blastn 16196 294 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleraceae Bullera Bullera hannae
4336453 4336453 PRJNA543299_P_NODE_13864_length_201_cov_1.342105_g13707_i0 PRJNA543299 13864 201 1.342105 2.69763105 Cladosporium herbarum 29918 Fungi Fungi 372 1.18e-98   NTclustered gi|284158823|gb|GU214410.1| 29918 g13707 i0 100 99.9502487562189 201 0 100 0 1 201 1897 2097 Cladosporium herbarum strain CBS 723.79 28S large subunit ribosomal RNA gene, partial sequence blastn 20090 372 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium herbarum
4946800 4946800 PRJNA543299_P_NODE_17044_length_182_cov_1.172932_g16887_i0 PRJNA543299 17044 182 1.172932 2.13473624 Opisthokonta 33154 Fungi Fungi 230 6.659999999999998e-56   NTclustered gi|2159204445|emb|OU942847.1| 175245 g16887 i0 89.474 80.7032967032967 190 9 99 6 1 181 1420 1233 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus04141 blastn 14688 230 1 Eukaryota Opisthokonta Fungi           uncultured fungus
6222251 6222251 PRJNA543299_P_NODE_14145_length_199_cov_2.040000_g13988_i0 PRJNA543299 14145 199 2.04 4.0596 Fungi 4751 Fungi Fungi 368 1.51e-97   NTclustered gi|658131632|emb|HF968958.1| 4874 g13988 i0 100 147.316582914573 199 0 100 0 1 199 1994 2192 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 29316 368 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
8162447 8162447 PRJNA543299_P_NODE_24007_length_163_cov_0.894737_g23850_i0 PRJNA543299 24007 163 0.894737 1.45842131 uncultured fungus 175245 Fungi Fungi 156 1.01e-33   NTclustered gi|375156063|gb|JQ311412.1| 175245 g23850 i0 85.806 78.9141104294479 155 13 94 5 1 154 297 151 Uncultured soil fungus clone OTU97-624 28S ribosomal RNA gene, partial sequence blastn 12863 156 1 Eukaryota Opisthokonta Fungi           uncultured fungus
10047086 10047086 PRJNA543299_P_NODE_19208_length_171_cov_1.852459_g19051_i0 PRJNA543299 19208 171 1.852459 3.16770489 Opisthokonta 33154 Fungi Fungi 316 4.6e-82   NTclustered gi|283827952|gb|EU019262.2| 29917 g19051 i0 100 100 171 0 100 0 1 171 2380 2550 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 17100 316 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
13872503 13872503 PRJNA543299_P_NODE_17971_length_177_cov_1.804688_g17814_i0 PRJNA543299 17971 177 1.804688 3.19429776 Ascomycota 4890 Fungi Fungi 327 2.2199999999999996e-85   NTclustered gi|1338684535|gb|MG889595.1| 5061 g17814 i0 100 100 177 0 100 0 1 177 867 691 Aspergillus niger isolate soil small subunit ribosomal RNA gene, partial sequence blastn 17700 327 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
15812428 15812428 PRJNA543299_P_NODE_23073_length_164_cov_0.886957_g22916_i0 PRJNA543299 23073 164 0.886957 1.45460948 Penicillium verrucosum 60171 Fungi Fungi 89.8 1.04e-13   NTclustered gi|2515965191|ref|XM_057219713.1| 60171 g22916 i0 98.039 0.609756097560976 51 1 31 0 1 51 847 897 Penicillium verrucosum uncharacterized protein (N7516_006993), partial mRNA blastn 100 89.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium verrucosum
17696593 17696593 PRJNA543299_P_NODE_9134_length_246_cov_1.157360_g8977_i0 PRJNA543299 9134 246 1.15736 2.8471056 Ascomycota 4890 Fungi Fungi 438 1.4599999999999996e-118   NTclustered gi|2034480785|gb|MZ152208.1| 61296 g8977 i0 99.177 99.2560975609756 243 2 99 0 4 246 116 358 Aureobasidium sp. isolate UFMG-CM-Y6821 large subunit ribosomal RNA gene, partial sequence blastn 24417 438 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium sp.
18361238 18361238 PRJNA543299_P_NODE_25515_length_161_cov_1.723214_g25358_i0 PRJNA543299 25515 161 1.723214 2.77437454 uncultured fungus 175245 Fungi Fungi 102 1.31e-17   NTclustered gi|2159203900|emb|OU942302.1| 175245 g25358 i0 90.909 60.6521739130435 77 5 47 2 86 161 222 147 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus03597 blastn 9765 102 1 Eukaryota Opisthokonta Fungi           uncultured fungus
18970175 18970175 PRJNA543299_P_NODE_17395_length_180_cov_1.366412_g17238_i0 PRJNA543299 17395 180 1.366412 2.4595416 Hormonema 46635 Fungi Fungi 316 4.899999999999999e-82   NTclustered gi|387156426|emb|HE806159.1| 209475 g17238 i0 98.333 100 180 3 100 0 1 180 1420 1599 Uncultured Dothideomycetes partial 26S rRNA gene, clone EopYyyyy blastn 18000 316 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes       uncultured Dothideomycetes
20245102 20245102 PRJNA543299_P_NODE_26536_length_158_cov_2.807339_g26379_i0 PRJNA543299 26536 158 2.807339 4.43559562 Nephroma 48858 Fungi Fungi 292 7.07e-75   NTclustered gi|1517971702|gb|MH887516.1| 203384 g26379 i0 100 100 158 0 100 0 1 158 4490 4647 Nephroma helveticum small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15800 292 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Peltigerales Nephromataceae Nephroma Nephroma helveticum
20911588 20911588 PRJNA543299_P_NODE_17997_length_177_cov_1.593750_g17840_i0 PRJNA543299 17997 177 1.59375 2.8209375 uncultured fungus 175245 Fungi Fungi 276 8.15e-70   NTclustered gi|2159200414|emb|OU939045.1| 175245 g17840 i0 94.915 95.3728813559322 177 8 100 1 1 177 1500 1325 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus00339 blastn 16881 276 1 Eukaryota Opisthokonta Fungi           uncultured fungus
20911798 20911798 PRJNA543299_P_NODE_6977_length_279_cov_3.069565_g6820_i0 PRJNA543299 6977 279 3.069565 8.56408635 uncultured fungus 175245 Fungi Fungi 108 5.41e-19   NTclustered gi|1189489950|gb|KY687716.1| 175245 g6820 i0 94.366 25.1003584229391 71 2 25 2 210 279 1407 1338 Uncultured fungus clone GL19521_135_G2819 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7003 108 1 Eukaryota Opisthokonta Fungi           uncultured fungus
21520692 21520692 PRJNA543299_P_NODE_15097_length_193_cov_1.416667_g14940_i0 PRJNA543299 15097 193 1.416667 2.73416731 Metschnikowia 27320 Fungi Fungi 52.8 0.017   NTclustered gi|927912810|gb|KR815866.1| 1715865 g14940 i0 100 0.870466321243523 28 0 15 0 9 36 186 159 Metschnikowia sp. UFMG-CM-Y3404 26S large subunit ribosomal RNA gene, partial sequence blastn 168 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Metschnikowia Metschnikowia sp. UFMG-CM-Y3404
23461897 23461897 PRJNA543299_P_NODE_22959_length_164_cov_0.886957_g22802_i0 PRJNA543299 22959 164 0.886957 1.45460948 Cladosporium halotolerans 1052096 Fungi Fungi 254 3.5e-63   NTclustered gi|2837720680|ref|XM_069368823.1| 1052096 g22802 i0 94.512 1 164 9 100 0 1 164 1203 1366 Cladosporium halotolerans uncharacterized protein (WHR41_00217), mRNA blastn 164 254 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
24070606 24070606 PRJNA543299_P_NODE_13759_length_202_cov_1.189542_g13602_i0 PRJNA543299 13759 202 1.189542 2.40287484 Eukaryota 2759 Fungi Fungi 368 1.54e-97   NTclustered gi|38570335|gb|L76614.1|CCURGOAA 5570 g13602 i0 99.505 100 202 1 100 0 1 202 1379 1580 Cenococcum geophilum strain 349 small subunit ribosomal RNA gene, complete sequence blastn 20200 368 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Gloniales Gloniaceae Cenococcum Cenococcum geophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;