RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA541476" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA541476 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3059267 3059267 PRJNA541476_P_NODE_10423_length_354_cov_2.811388_g10217_i0 PRJNA541476 10423 354 2.811388 9.95231352 Linderina pennispora 61395 Fungi Fungi 335 2.9699999999999993e-87   NTclustered gi|2028323356|ref|XM_040888071.1| 61395 g10217 i0 85.366 97.4265536723164 328 42 92 5 30 354 2366 2042 Linderina pennispora P-loop containing nucleoside triphosphate hydrolase protein (DL89DRAFT_268891), mRNA blastn 34489 335 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
9437543 9437543 PRJNA541476_P_NODE_6728_length_436_cov_1.779614_g6524_i0 PRJNA541476 6728 436 1.779614 7.75911704 Spiromyces aspiralis 68401 Fungi Fungi 411 6.029999999999999e-110   NTclustered gi|358030843|dbj|AB609155.1| 68401 g6524 i0 83.834 39.7385321100917 433 68 99 2 1 432 1278 847 Spiromyces aspiralis EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 22631 blastn 17326 411 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
19634519 19634519 PRJNA541476_P_NODE_13836_length_318_cov_2.718367_g13630_i0 PRJNA541476 13836 318 2.718367 8.64440706 Kickxella alabastrina 61397 Fungi Fungi 278 4.52e-70   NTclustered gi|2324017890|ref|XM_051536612.1| 61397 g13630 i0 86.992 79.7389937106918 246 32 77 0 66 311 1263 1018 Kickxella alabastrina ribosomal protein L3-domain-containing protein (BX661DRAFT_184853), mRNA blastn 25357 278 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;