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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA541476" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA541476 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
508402 508402 PRJNA541476_P_NODE_1021_length_1153_cov_8.037963_g852_i1 PRJNA541476 1021 1153 8.037963 92.67771339 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1170 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g852 i1 98.206 57.2515177797051 669 12 58 0 1 669 169 837 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 66011 1170 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
509318 509318 PRJNA541476_P_NODE_6401_length_446_cov_3.898123_g6198_i0 PRJNA541476 6401 446 3.898123 17.38562858 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 597 4.4199999999999985e-166   NTclustered gi|238617605|gb|FJ973380.1| 45107 g6198 i0 90.828 100.80269058296 447 39 100 2 1 446 1639 1194 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 44958 597 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
509341 509341 PRJNA541476_P_NODE_8441_length_389_cov_24.246835_g8237_i0 PRJNA541476 8441 389 24.246835 94.32018815 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 712 0   NTclustered gi|33309639|gb|AF411276.1| 188950 g8237 i0 99.743 86.1645244215938 389 0 100 1 1 389 1705 1318 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 33518 712 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
509369 509369 PRJNA541476_P_NODE_981_length_1172_cov_9.822566_g852_i0 PRJNA541476 981 1172 9.822566 115.12047352 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1170 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g852 i0 98.206 56.3233788395904 669 12 57 0 1 669 169 837 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 66011 1170 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
1784670 1784670 PRJNA541476_P_NODE_5162_length_500_cov_113.700234_g4961_i0 PRJNA541476 5162 500 113.700234 568.50117 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 917 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g4961 i0 99.8 22.774 499 1 99 0 2 500 819 321 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 11387 917 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4336228 4336228 PRJNA541476_P_NODE_7104_length_423_cov_35.320000_g6900_i0 PRJNA541476 7104 423 35.32 149.4036 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 782 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g6900 i0 100 101.330969267139 423 0 100 0 1 423 3094 2672 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 42863 782 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4336264 4336264 PRJNA541476_P_NODE_964_length_1182_cov_5.495041_g836_i0 PRJNA541476 964 1182 5.495041 64.95138462 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1633 0   NTclustered gi|302026154|gb|GQ377660.1| 188950 g836 i0 99.664 81.6116751269035 893 3 76 0 285 1177 893 1 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 96465 1633 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5613049 5613049 PRJNA541476_P_NODE_42305_length_206_cov_49.052632_g42099_i0 PRJNA541476 42305 206 49.052632 101.04842192 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 377 2.62e-100   NTclustered gi|238617602|gb|FJ973377.1| 188950 g42099 i0 100 70.3398058252427 204 0 99 0 3 206 1663 1460 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 14490 377 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
6886905 6886905 PRJNA541476_P_NODE_5926_length_465_cov_4.260204_g5723_i0 PRJNA541476 5926 465 4.260204 19.8099486 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 381 5.069999999999999e-101   NTclustered gi|302563026|dbj|AB546336.1| 39717 g5723 i0 82.619 73.3741935483871 443 64 94 9 28 465 591 157 Paulinella chromatophora EF-1a mRNA for elongation factor 1alpha, partial cds blastn 34119 381 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
15811292 15811292 PRJNA541476_P_NODE_16713_length_298_cov_6.453333_g16507_i0 PRJNA541476 16713 298 6.453333 19.23093234 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 108 5.83e-19   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g16507 i0 75.591 14.2248322147651 254 43 85 11 47 298 4021 3785 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4239 108 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
17086759 17086759 PRJNA541476_P_NODE_42114_length_216_cov_60.139860_g41908_i0 PRJNA541476 42114 216 60.13986 129.9020976 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 399 5.909999999999999e-107   NTclustered gi|238617602|gb|FJ973377.1| 188950 g41908 i0 100 100.282407407407 216 0 100 0 1 216 1039 824 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 21661 399 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20910403 20910403 PRJNA541476_P_NODE_12057_length_335_cov_2.763359_g11851_i0 PRJNA541476 12057 335 2.763359 9.25725265 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 569 7.049999999999998e-158   NTclustered gi|197723521|gb|EF681900.2| 458884 g11851 i0 97.313 1.92238805970149 335 9 100 0 1 335 692 358 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 644 569 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
22186062 22186062 PRJNA541476_P_NODE_6198_length_454_cov_125.094488_g5995_i0 PRJNA541476 6198 454 125.094488 567.92897552 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 351 3.87e-92   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g5995 i0 83.416 48.6651982378855 404 42 88 17 1 401 3658 4039 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22094 351 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
23461526 23461526 PRJNA541476_P_NODE_7819_length_404_cov_4.570997_g7615_i0 PRJNA541476 7819 404 4.570997 18.46682788 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 736 0   NTclustered gi|300676732|gb|GQ377662.1| 188950 g7615 i0 99.505 35.8267326732673 404 2 100 0 1 404 250 653 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 14474 736 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24735234 24735234 PRJNA541476_P_NODE_8180_length_395_cov_7.245342_g7976_i0 PRJNA541476 8180 395 7.245342 28.6191009 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 459 1.91e-124   NTclustered gi|238617666|gb|FJ973412.1| 188950 g7976 i0 99.602 35.4556962025316 251 1 64 0 145 395 1 251 Bodomorpha minima strain ATCC 50339 alpha-tubulin (atub) gene, partial cds blastn 14005 459 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;