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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA541476" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 11 ✖

bioproject 1

  • PRJNA541476 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
508421 508421 PRJNA541476_P_NODE_10941_length_348_cov_1.480000_g10735_i0 PRJNA541476 10941 348 1.48 5.1504 Cavenderia fasciculata 261658 Evosea other_Eukaryota 89.8 2.51e-13   NTclustered gi|187764061|ref|NC_010653.1| 261658 g10735 i0 98.039 0.310344827586207 51 1 15 0 194 244 21227 21177 Dictyostelium fasciculatum mitochondrion, complete genome blastn 108 89.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
3060137 3060137 PRJNA541476_P_NODE_4723_length_524_cov_1.860310_g4524_i0 PRJNA541476 4723 524 1.86031 9.7480244 Balamuthia sp. 3395499 Discosea other_Eukaryota 119 4.99e-22   NTclustered gi|2895086748|gb|PV023377.1| 3395499 g4524 i0 75.269 11.631679389313 279 53 51 14 1 269 455 183 Balamuthia sp. isolate XJP24 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 6095 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Balamuthiidae Balamuthia Balamuthia sp.
5612248 5612248 PRJNA541476_P_NODE_14525_length_313_cov_1.300000_g14319_i0 PRJNA541476 14525 313 1.3 4.069 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 60.2 1.75e-4   NTclustered gi|470373777|ref|XM_004332999.1| 1257118 g14319 i0 90.909 9.64856230031949 44 4 14 0 66 109 1255 1298 Acanthamoeba castellanii str. Neff adipose-regulatory protein (Seipin) protein (ACA1_048240), partial mRNA blastn 3020 60.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6886928 6886928 PRJNA541476_P_NODE_7686_length_408_cov_1.808955_g7482_i0 PRJNA541476 7686 408 1.808955 7.3805364 Lamproderma scintillans 1115720 Evosea other_Eukaryota 383 1.2199999999999998e-101   NTclustered gi|2306687667|gb|MZ234283.1| 1115720 g7482 i0 83.784 92.8161764705882 407 62 99 4 1 405 290 694 Lamproderma scintillans voucher LE265994 translation elongation factor EF-1 alpha (EF1A) gene, partial cds blastn 37869 383 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Lamproderma Lamproderma scintillans
13263063 13263063 PRJNA541476_P_NODE_4571_length_533_cov_2.589130_g4372_i0 PRJNA541476 4571 533 2.58913 13.8000629 Dictyostelium purpureum 5786 Evosea other_Eukaryota 405 3.49e-108   NTclustered gi|330791897|ref|XM_003283980.1| 5786 g4372 i0 80.718 47.2270168855535 529 95 99 5 7 533 1382 859 Dictyostelium purpureum 26S proteasome ATPase 2 subunit (DICPUDRAFT_96551), mRNA blastn 25172 405 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
14537205 14537205 PRJNA541476_P_NODE_13132_length_325_cov_1.198413_g12926_i0 PRJNA541476 13132 325 1.198413 3.89484225 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 568 2.4499999999999992e-157   NTclustered gi|659103845|gb|KJ569729.1| 1512276 g12926 i0 98.154 86.0276923076923 325 6 100 0 1 325 8 332 Cochliopodium kieliense isolate 2 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 27959 568 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
16421318 16421318 PRJNA541476_P_NODE_19593_length_284_cov_1.189573_g19387_i0 PRJNA541476 19593 284 1.189573 3.37838732 root 1 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|330844935|ref|XM_003294315.1| 5786 g19387 i0 87.5 11.7676056338028 48 6 17 0 204 251 2180 2133 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_96022), partial mRNA blastn 3342 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19635420 19635420 PRJNA541476_P_NODE_9476_length_369_cov_3.111486_g9270_i0 PRJNA541476 9476 369 3.111486 11.48138334 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 556 6.1e-154   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g9270 i0 95.714 38.3739837398374 350 7 93 8 26 369 4 351 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 14160 556 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
20910775 20910775 PRJNA541476_P_NODE_27917_length_253_cov_2.177778_g27711_i0 PRJNA541476 27917 253 2.177778 5.50977834 Heterostelium album 2086695 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|1160555684|ref|XM_020573667.1| 670386 g27711 i0 96.875 0.58498023715415 32 1 13 0 188 219 1725 1694 Polysphondylium pallidum PN500 sumo-activating enzyme subunit 2 (uba2), partial mRNA blastn 148 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
22185633 22185633 PRJNA541476_P_NODE_30218_length_250_cov_21.209040_g30012_i0 PRJNA541476 30218 250 21.20904 53.0226 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 331 2.6e-86   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g30012 i0 91.736 23.38 242 15 96 5 11 250 878 640 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 5845 331 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
23460768 23460768 PRJNA541476_P_NODE_19719_length_283_cov_1.476190_g19513_i0 PRJNA541476 19719 283 1.47619 4.1776177 Dictyostelium purpureum 5786 Evosea other_Eukaryota 54.7 0.007   NTclustered gi|330805835|ref|XM_003290835.1| 5786 g19513 i0 100 0.102473498233216 29 0 10 0 255 283 607 579 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_81598), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;