RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA540466" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA540466 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1783720 1783720 PRJNA540466_S_NODE_7302_length_598_cov_5.236190_g6827_i0 PRJNA540466 7302 598 5.23619 31.3124162 Lytechinus pictus 7653 Echinodermata other_Eukaryota 291 1.1499999999999998e-73   NTclustered gi|2707444401|ref|XM_064105648.1| 7653 g6827 i0 82.675 54.9046822742475 329 55 55 2 16 343 876 1203 PREDICTED: Lytechinus pictus small ribosomal subunit protein uS5 (LOC129269342), mRNA blastn 32833 291 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
5611638 5611638 PRJNA540466_S_NODE_17485_length_421_cov_1.212644_g16936_i0 PRJNA540466 17485 421 1.212644 5.10523124 Diadema antillarum 105358 Echinodermata other_Eukaryota 122 3.049999999999999e-23   NTclustered gi|2919496863|ref|XM_071648857.1| 105358 g16936 i0 83.333 1.90736342042755 132 22 31 0 20 151 256 387 PREDICTED: Diadema antillarum U6 snRNA-associated Sm-like protein LSm6 (LOC139738197), mRNA blastn 803 122 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
8160919 8160919 PRJNA540466_S_NODE_44907_length_276_cov_1.896552_g44358_i0 PRJNA540466 44907 276 1.896552 5.23448352 Acanthaster planci 133434 Echinodermata other_Eukaryota 63.9 1.17e-5   NTclustered gi|1229160970|ref|XM_022237704.1| 133434 g44358 i0 100 0.550724637681159 34 0 12 0 143 176 81 114 PREDICTED: Acanthaster planci 60S ribosomal protein L8 (LOC110980756), mRNA blastn 152 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
9436122 9436122 PRJNA540466_S_NODE_13848_length_466_cov_21.117048_g13302_i0 PRJNA540466 13848 466 21.117048 98.40544368 Asterias rubens 7604 Echinodermata other_Eukaryota 207 9.13e-49   NTclustered gi|1834261769|ref|XM_033773906.1| 7604 g13302 i0 80 14.5321888412017 280 56 60 0 111 390 119 398 PREDICTED: Asterias rubens 60S ribosomal protein L44-like (LOC117291900), mRNA blastn 6772 207 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
13261766 13261766 PRJNA540466_S_NODE_28811_length_334_cov_4.045977_g28262_i0 PRJNA540466 28811 334 4.045977 13.51356318 Diadema antillarum 105358 Echinodermata other_Eukaryota 104 8.57e-18   NTclustered gi|2919456096|ref|XM_071641670.1| 105358 g28262 i0 87.097 0.55688622754491 93 10 28 2 1 92 1225 1316 PREDICTED: Diadema antillarum long-chain specific acyl-CoA dehydrogenase, mitochondrial-like (LOC139730801), mRNA blastn 186 104 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
20909970 20909970 PRJNA540466_S_NODE_25597_length_353_cov_1.825000_g25048_i0 PRJNA540466 25597 353 1.825 6.44225 Asterias rubens 7604 Echinodermata other_Eukaryota 226 1.86e-54   NTclustered gi|1834254684|ref|XM_033773412.1| 7604 g25048 i0 80.836 31.4872521246459 287 55 81 0 59 345 541 255 PREDICTED: Asterias rubens ubiquitin-40S ribosomal protein S27a (LOC117291593), mRNA blastn 11115 226 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
22185096 22185096 PRJNA540466_S_NODE_7878_length_583_cov_36.496078_g7388_i0 PRJNA540466 7878 583 36.496078 212.77213474 Diadema antillarum 105358 Echinodermata other_Eukaryota 259 3.1600000000000004e-64   NTclustered gi|2919420483|ref|XM_071635166.1| 105358 g7388 i0 77.828 44.0943396226415 442 82 74 12 97 530 505 72 PREDICTED: Diadema antillarum large ribosomal subunit protein uL15-like (LOC139723966), mRNA blastn 25707 259 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;