contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA540466" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5611732 | 5611732 | PRJNA540466_S_NODE_28265_length_337_cov_2.553030_g27716_i0 | PRJNA540466 | 28265 | 337 | 2.55303 | 8.6037111 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 525 | 1.5599999999999995e-144 | NTclustered | gi|94554390|gb|CP000359.1| | 319795 | g27716 | i0 | 98.328 | 0.887240356083086 | 299 | 5 | 89 | 0 | 19 | 317 | 2117004 | 2117302 | Deinococcus geothermalis DSM 11300, complete genome | blastn | 299 | 525 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 6222032 | 6222032 | PRJNA540466_S_NODE_23785_length_365_cov_3.205479_g23236_i0 | PRJNA540466 | 23785 | 365 | 3.205479 | 11.69999835 | Thermus | 270 | Bacteria | Bacteria | 446 | 1.36e-120 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g23236 | i0 | 98.8 | 32.9698630136986 | 250 | 3 | 68 | 0 | 17 | 266 | 844950 | 845199 | Thermus scotoductus SA-01, complete genome | blastn | 12034 | 446 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 6885853 | 6885853 | PRJNA540466_S_NODE_55886_length_252_cov_4.262570_g55337_i0 | PRJNA540466 | 55886 | 252 | 4.26257 | 10.7416764 | Deinococcus taeanensis | 2737050 | Bacteria | Bacteria | 291 | 4.45e-74 | NTclustered | gi|2105694697|gb|CP083456.1| | 2737050 | g55337 | i0 | 97.093 | 138.563492063492 | 172 | 5 | 68 | 0 | 69 | 240 | 1284 | 1113 | Deinococcus taeanensis strain TS293 plasmid p_TS293_2, complete sequence | blastn | 34918 | 291 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus taeanensis | ||
| 8160713 | 8160713 | PRJNA540466_S_NODE_23047_length_370_cov_38051.855219_g22498_i0 | PRJNA540466 | 23047 | 370 | 38051.855219 | 140791.8643103 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 411 | 5.039999999999999e-110 | NTclustered | gi|94554390|gb|CP000359.1| | 319795 | g22498 | i0 | 98.298 | 108.3 | 235 | 3 | 63 | 1 | 14 | 247 | 2375476 | 2375242 | Deinococcus geothermalis DSM 11300, complete genome | blastn | 40071 | 411 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 8160829 | 8160829 | PRJNA540466_S_NODE_33407_length_313_cov_3.666667_g32858_i0 | PRJNA540466 | 33407 | 313 | 3.666667 | 11.47666771 | Thermus antranikianii | 88190 | Bacteria | Bacteria | 172 | 2.1499999999999998e-38 | NTclustered | gi|2049910225|gb|CP076325.1| | 88190 | g32858 | i0 | 81.991 | 22.6261980830671 | 211 | 30 | 66 | 7 | 23 | 229 | 357538 | 357332 | MAG: Thermus antranikianii isolate RBS10-92 chromosome, complete genome | blastn | 7082 | 172 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus antranikianii | ||
| 8771513 | 8771513 | PRJNA540466_S_NODE_50007_length_264_cov_2.104712_g49458_i0 | PRJNA540466 | 50007 | 264 | 2.104712 | 5.55643968 | Deinococcus | 1298 | Bacteria | Bacteria | 292 | 1.31e-74 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g49458 | i0 | 98.204 | 98.6515151515152 | 167 | 3 | 63 | 0 | 82 | 248 | 1663 | 1497 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 26044 | 292 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 9436454 | 9436454 | PRJNA540466_S_NODE_52008_length_260_cov_1.561497_g51459_i0 | PRJNA540466 | 52008 | 260 | 1.561497 | 4.0598922 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 394 | 3.419999999999999e-105 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g51459 | i0 | 96.266 | 17.1346153846154 | 241 | 8 | 93 | 1 | 1 | 241 | 430760 | 430999 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 4455 | 394 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 10046933 | 10046933 | PRJNA540466_S_NODE_63048_length_242_cov_2.869822_g62499_i0 | PRJNA540466 | 63048 | 242 | 2.869822 | 6.94496924 | Deinococcus | 1298 | Bacteria | Bacteria | 263 | 9.250000000000001e-66 | NTclustered | gi|2706837832|gb|CP149782.1| | 3112952 | g62499 | i0 | 95.21 | 9.75619834710744 | 167 | 7 | 69 | 1 | 3 | 169 | 2014637 | 2014472 | Deinococcus sp. VB142 chromosome 1, complete sequence | blastn | 2361 | 263 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 | ||
| 10711977 | 10711977 | PRJNA540466_S_NODE_23789_length_365_cov_3.126712_g23240_i0 | PRJNA540466 | 23789 | 365 | 3.126712 | 11.4124988 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 553 | 7.789999999999998e-153 | NTclustered | gi|110746139|gb|CP000358.2| | 319795 | g23240 | i0 | 99.029 | 0.846575342465753 | 309 | 2 | 84 | 1 | 24 | 331 | 389460 | 389768 | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence | blastn | 309 | 553 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 12597480 | 12597480 | PRJNA540466_S_NODE_55790_length_253_cov_0.866667_g55241_i0 | PRJNA540466 | 55790 | 253 | 0.866667 | 2.19266751 | Deinococcus | 1298 | Bacteria | Bacteria | 111 | 3.73e-20 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g55241 | i0 | 96.97 | 71.304347826087 | 66 | 2 | 26 | 0 | 168 | 233 | 1855 | 1790 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 18040 | 111 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 12597484 | 12597484 | PRJNA540466_S_NODE_59130_length_248_cov_0.880000_g58581_i0 | PRJNA540466 | 59130 | 248 | 0.88 | 2.1824 | Thermus | 270 | Bacteria | Bacteria | 414 | 2.48e-111 | NTclustered | gi|1519238714|emb|LR027517.1| | 274 | g58581 | i0 | 96.787 | 45.4475806451613 | 249 | 6 | 99 | 2 | 2 | 248 | 954357 | 954605 | Thermus thermophilus isolate TTHNAR1 genome assembly, chromosome: 1 | blastn | 11271 | 414 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 15810737 | 15810737 | PRJNA540466_S_NODE_28433_length_336_cov_3.342205_g27884_i0 | PRJNA540466 | 28433 | 336 | 3.342205 | 11.2298088 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 327 | 4.7e-85 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g27884 | i0 | 89.922 | 121.264880952381 | 258 | 20 | 76 | 5 | 7 | 262 | 545790 | 546043 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 40745 | 327 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 15810892 | 15810892 | PRJNA540466_S_NODE_45493_length_275_cov_0.846535_g44944_i0 | PRJNA540466 | 45493 | 275 | 0.846535 | 2.32797125 | Deinococcus grandis | 57498 | Bacteria | Bacteria | 436 | 5.969999999999999e-118 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g44944 | i0 | 96.241 | 235.061818181818 | 266 | 10 | 97 | 0 | 10 | 275 | 73437 | 73702 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 64642 | 436 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 17085613 | 17085613 | PRJNA540466_S_NODE_48194_length_268_cov_1.938462_g47645_i0 | PRJNA540466 | 48194 | 268 | 1.938462 | 5.1950781599999996 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 422 | 1.62e-113 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g47645 | i0 | 98.739 | 128.417910447761 | 238 | 2 | 88 | 1 | 28 | 264 | 410481 | 410718 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 34416 | 422 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 17085616 | 17085616 | PRJNA540466_S_NODE_48514_length_267_cov_3.417526_g47965_i0 | PRJNA540466 | 48514 | 267 | 3.417526 | 9.12479442 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 405 | 1.63e-108 | NTclustered | gi|94554390|gb|CP000359.1| | 319795 | g47965 | i0 | 99.55 | 35.7752808988764 | 222 | 1 | 83 | 0 | 40 | 261 | 2300742 | 2300963 | Deinococcus geothermalis DSM 11300, complete genome | blastn | 9552 | 405 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 17085792 | 17085792 | PRJNA540466_S_NODE_69334_length_222_cov_4.845638_g68785_i0 | PRJNA540466 | 69334 | 222 | 4.845638 | 10.75731636 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 346 | 8.07e-91 | NTclustered | gi|94554390|gb|CP000359.1| | 319795 | g68785 | i0 | 97.087 | 7.81531531531532 | 206 | 4 | 92 | 1 | 12 | 215 | 650349 | 650144 | Deinococcus geothermalis DSM 11300, complete genome | blastn | 1735 | 346 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 18359497 | 18359497 | PRJNA540466_S_NODE_32135_length_319_cov_0.926829_g31586_i0 | PRJNA540466 | 32135 | 319 | 0.926829 | 2.95658451 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 436 | 7.069999999999999e-118 | NTclustered | gi|1819261009|gb|CP049357.1| | 1288484 | g31586 | i0 | 98.387 | 11.6175548589342 | 248 | 4 | 78 | 0 | 21 | 268 | 1183952 | 1183705 | Deinococcus wulumuqiensis R12 chromosome, complete genome | blastn | 3706 | 436 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 19634287 | 19634287 | PRJNA540466_S_NODE_54556_length_255_cov_1.631868_g54007_i0 | PRJNA540466 | 54556 | 255 | 1.631868 | 4.1612634 | Deinococcus metallilatus | 1211322 | Bacteria | Bacteria | 274 | 4.54e-69 | NTclustered | gi|1609451317|gb|CP038512.1| | 1211322 | g54007 | i0 | 89.091 | 84.0274509803922 | 220 | 24 | 86 | 0 | 17 | 236 | 613334 | 613115 | Deinococcus metallilatus strain MA1002 chromosome | blastn | 21427 | 274 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus metallilatus | ||
| 19634348 | 19634348 | PRJNA540466_S_NODE_62856_length_243_cov_0.870588_g62307_i0 | PRJNA540466 | 62856 | 243 | 0.870588 | 2.11552884 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 387 | 5.29e-103 | NTclustered | gi|94554390|gb|CP000359.1| | 319795 | g62307 | i0 | 97.788 | 1.06172839506173 | 226 | 2 | 92 | 3 | 21 | 243 | 830582 | 830807 | Deinococcus geothermalis DSM 11300, complete genome | blastn | 258 | 387 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 19634382 | 19634382 | PRJNA540466_S_NODE_66776_length_232_cov_2.943396_g66227_i0 | PRJNA540466 | 66776 | 232 | 2.943396 | 6.82867872 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 339 | 1.42e-88 | NTclustered | gi|94554390|gb|CP000359.1| | 319795 | g66227 | i0 | 98.438 | 2.62931034482759 | 192 | 3 | 83 | 0 | 22 | 213 | 1476018 | 1476209 | Deinococcus geothermalis DSM 11300, complete genome | blastn | 610 | 339 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 20244921 | 20244921 | PRJNA540466_S_NODE_44376_length_277_cov_5.156863_g43827_i0 | PRJNA540466 | 44376 | 277 | 5.156863 | 14.28451051 | Deinococcus | 1298 | Bacteria | Bacteria | 394 | 3.68e-105 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g43827 | i0 | 99.537 | 241.068592057762 | 216 | 1 | 78 | 0 | 21 | 236 | 1632 | 1847 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 66776 | 394 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 22795679 | 22795679 | PRJNA540466_S_NODE_53138_length_258_cov_1.075676_g52589_i0 | PRJNA540466 | 53138 | 258 | 1.075676 | 2.77524408 | Deinococcus | 1298 | Bacteria | Bacteria | 370 | 5.71e-98 | NTclustered | gi|2706837832|gb|CP149782.1| | 3112952 | g52589 | i0 | 96.833 | 12.8488372093023 | 221 | 7 | 86 | 0 | 1 | 221 | 126113 | 126333 | Deinococcus sp. VB142 chromosome 1, complete sequence | blastn | 3315 | 370 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 | ||
| 24733987 | 24733987 | PRJNA540466_S_NODE_37240_length_299_cov_1.734513_g36691_i0 | PRJNA540466 | 37240 | 299 | 1.734513 | 5.18619387 | Thermus brockianus | 56956 | Bacteria | Bacteria | 374 | 5.22e-99 | NTclustered | gi|2199615633|dbj|AP025595.1| | 56956 | g36691 | i0 | 97.273 | 0.735785953177257 | 220 | 6 | 74 | 0 | 9 | 228 | 23837 | 23618 | Thermus brockianus SNM4-1 plasmid pTbrSNM4-1c DNA, complete sequence | blastn | 220 | 374 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus brockianus | ||
| 25344789 | 25344789 | PRJNA540466_S_NODE_34840_length_308_cov_1.242553_g34291_i0 | PRJNA540466 | 34840 | 308 | 1.242553 | 3.82706324 | Deinococcus | 1298 | Bacteria | Bacteria | 448 | 3.1399999999999996e-121 | NTclustered | gi|1514756464|dbj|LC433574.1| | 47478 | g34291 | i0 | 98.077 | 89.211038961039 | 260 | 0 | 83 | 3 | 49 | 303 | 819 | 560 | Deinococcus sp. TM138 gene for 16S ribosomal RNA, partial sequence | blastn | 27477 | 448 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 25344835 | 25344835 | PRJNA540466_S_NODE_69140_length_224_cov_4.331126_g68591_i0 | PRJNA540466 | 69140 | 224 | 4.331126 | 9.70172224 | Thermus | 270 | Bacteria | Bacteria | 322 | 1.37e-83 | NTclustered | gi|982539283|gb|CP014141.1| | 456163 | g68591 | i0 | 99.435 | 7.38392857142857 | 177 | 1 | 79 | 0 | 18 | 194 | 1422373 | 1422549 | Thermus parvatiensis strain RL, complete genome | blastn | 1654 | 322 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus parvatiensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;