contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA540466" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3059003 | 3059003 | PRJNA540466_S_NODE_42963_length_281_cov_2.884615_g42414_i0 | PRJNA540466 | 42963 | 281 | 2.884615 | 8.10576815 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 350 | 8.2e-92 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g42414 | i0 | 91.085 | 112.800711743772 | 258 | 23 | 92 | 0 | 1 | 258 | 2019860 | 2019603 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 31697 | 350 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 3669739 | 3669739 | PRJNA540466_S_NODE_33543_length_313_cov_1.450000_g32994_i0 | PRJNA540466 | 33543 | 313 | 1.45 | 4.5385 | Parachlamydia | 83551 | Bacteria | Bacteria | 316 | 9.4e-82 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g32994 | i0 | 88.636 | 96.0415335463259 | 264 | 25 | 84 | 5 | 52 | 313 | 289 | 549 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 30061 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 6885527 | 6885527 | PRJNA540466_S_NODE_18606_length_409_cov_2.062500_g18057_i0 | PRJNA540466 | 18606 | 409 | 2.0625 | 8.435625 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 483 | 1.18e-131 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g18057 | i0 | 89.61 | 78.0953545232274 | 385 | 33 | 93 | 6 | 30 | 409 | 2003145 | 2002763 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 31941 | 483 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 8161103 | 8161103 | PRJNA540466_S_NODE_68187_length_228_cov_3.993548_g67638_i0 | PRJNA540466 | 68187 | 228 | 3.993548 | 9.10528944 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 377 | 2.95e-100 | NTclustered | gi|262410150|gb|GU074326.1| | 120965 | g67638 | i0 | 99.519 | 92.4210526315789 | 208 | 0 | 91 | 1 | 22 | 228 | 50 | 257 | Uncultured planctomycete clone 2S49 16S ribosomal RNA gene, partial sequence | blastn | 21072 | 377 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 10712333 | 10712333 | PRJNA540466_S_NODE_59609_length_247_cov_1.339080_g59060_i0 | PRJNA540466 | 59609 | 247 | 1.33908 | 3.3075276 | Rhodopirellula baltica | 265606 | Bacteria | Bacteria | 60.2 | 1.33e-4 | NTclustered | gi|32445988|emb|BX294148.1| | 243090 | g59060 | i0 | 100 | 8.33603238866397 | 32 | 0 | 13 | 0 | 151 | 182 | 35552 | 35583 | Rhodopirellula baltica SH 1 complete genome; segment 16/24 | blastn | 2059 | 60.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Rhodopirellula | Rhodopirellula baltica | |
| 18359682 | 18359682 | PRJNA540466_S_NODE_53435_length_257_cov_2.070652_g52886_i0 | PRJNA540466 | 53435 | 257 | 2.070652 | 5.32157564 | Maioricimonas rarisocia | 2528026 | Bacteria | Bacteria | 248 | 2.78e-61 | NTclustered | gi|1712603021|gb|CP036275.1| | 2528026 | g52886 | i0 | 90.052 | 80.6070038910506 | 191 | 19 | 74 | 0 | 31 | 221 | 1845629 | 1845439 | Maioricimonas rarisocia strain Mal4 chromosome, complete genome | blastn | 20716 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Maioricimonas | Maioricimonas rarisocia | |
| 20909996 | 20909996 | PRJNA540466_S_NODE_28137_length_338_cov_1.520755_g27588_i0 | PRJNA540466 | 28137 | 338 | 1.520755 | 5.1401519 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 392 | 1.66e-104 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g27588 | i0 | 89.423 | 157.470414201183 | 312 | 32 | 92 | 1 | 12 | 322 | 2002575 | 2002886 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 53225 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;