RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA540466" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA540466 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
508299 508299 PRJNA540466_S_NODE_60081_length_246_cov_2.716763_g59532_i0 PRJNA540466 60081 246 2.716763 6.68323698 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.022   NTclustered gi|2794932944|ref|XM_067876217.1| 2049356 g59532 i0 100 0.113821138211382 28 0 11 0 170 197 2188 2161 Monocercomonoides exilis 3',5'-cyclic-AMP phosphodiesterase (MONOS_6019), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
14536734 14536734 PRJNA540466_S_NODE_2452_length_813_cov_14.101351_g2158_i0 PRJNA540466 2452 813 14.101351 114.64398363 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 54.7 0.023   NTclustered gi|2319667100|ref|XM_001318920.2| 412133 g2158 i0 100 0.035670356703567 29 0 4 0 742 770 191 219 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0865260), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
22184778 22184778 PRJNA540466_S_NODE_34438_length_309_cov_3.224576_g33889_i0 PRJNA540466 34438 309 3.224576 9.96393984 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 372 1.95e-98   NTclustered gi|2794897663|ref|XM_067912778.1| 135588 g33889 i0 90.681 191.398058252427 279 26 90 0 1 279 412 690 Histomonas meleagridis Polyubiquitin-B (GO595_010133), partial mRNA blastn 59142 372 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;