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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

bioproject 1

  • PRJNA534016 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15810277 15810277 PRJNA534016_P_NODE_18673_length_237_cov_2.756098_g18583_i0 PRJNA534016 18673 237 2.756098 6.53195226 Promethearchaeota archaeon 2053489 Archaea Archaea 52.8 0.021   NTclustered gi|2107767831|gb|CP070831.1| 2053489 g18583 i0 100 0.118143459915612 28 0 12 0 160 187 856896 856923 MAG: Promethearchaeota archaeon isolate bin108 chromosome blastn 28 52.8 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
22184303 22184303 PRJNA534016_P_NODE_17598_length_242_cov_2.071006_g17508_i0 PRJNA534016 17598 242 2.071006 5.01183452 uncultured Nanobdellati archaeon 2219213 Archaea Archaea 52.8 0.022   NTclustered gi|1572541193|emb|LR135916.1| 2219213 g17508 i0 96.774 0.128099173553719 31 1 13 0 41 71 57658 57628 uncultured DPANN archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 31 52.8 1 Archaea   Nanobdellati           uncultured Nanobdellati archaeon
23459664 23459664 PRJNA534016_P_NODE_13299_length_253_cov_1.711111_g13209_i0 PRJNA534016 13299 253 1.711111 4.32911083 Candidatus Nitrosopelagicus brevis 1410606 Archaea Archaea 52.8 0.023   NTclustered gi|742120812|gb|CP007026.1| 1410606 g13209 i0 100 0.110671936758893 28 0 11 0 55 82 863770 863743 Candidatus Nitrosopelagicus brevis strain CN25, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosopelagicus Candidatus Nitrosopelagicus brevis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;