contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_phylum = "Rotifera"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1782830 | 1782830 | PRJNA534016_P_NODE_15122_length_248_cov_0.880000_g15032_i0 | PRJNA534016 | 15122 | 248 | 0.88 | 2.1824 | Brachionus angularis | 396692 | Rotifera | other_Eukaryota | 243 | 1.24e-59 | NTclustered | gi|1999716438|gb|MT875426.1| | 396692 | g15032 | i0 | 84.4 | 74.7782258064516 | 250 | 35 | 100 | 3 | 1 | 248 | 904 | 1151 | Brachionus angularis chromosome II mitochondrion, complete sequence | blastn | 18545 | 243 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus angularis | |
| 3058429 | 3058429 | PRJNA534016_P_NODE_2203_length_551_cov_2.824268_g2114_i0 | PRJNA534016 | 2203 | 551 | 2.824268 | 15.56171668 | Adineta vaga | 104782 | Rotifera | other_Eukaryota | 712 | 0 | NTclustered | gi|134141736|gb|EF173232.1| | 104782 | g2114 | i0 | 90 | 98.5009074410163 | 550 | 55 | 99 | 0 | 1 | 550 | 55 | 604 | Adineta vaga isolate NZ.1.3 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial | blastn | 54274 | 712 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Adinetida | Adinetidae | Adineta | Adineta vaga | |
| 3058449 | 3058449 | PRJNA534016_P_NODE_3303_length_448_cov_3.082667_g3213_i0 | PRJNA534016 | 3303 | 448 | 3.082667 | 13.81034816 | Brachionus plicatilis | 10195 | Rotifera | other_Eukaryota | 294 | 6.53e-75 | NTclustered | gi|218117267|emb|AM980961.1| | 10195 | g3213 | i0 | 81.766 | 57.4620535714286 | 351 | 64 | 78 | 0 | 98 | 448 | 10 | 360 | Brachionus plicatilis partial mRNA for 40S ribosomal protein S24, (RPS24 gene) | blastn | 25743 | 294 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus plicatilis | |
| 8160340 | 8160340 | PRJNA534016_P_NODE_4407_length_393_cov_3.740625_g4317_i0 | PRJNA534016 | 4407 | 393 | 3.740625 | 14.70065625 | Philodina citrina | 468664 | Rotifera | other_Eukaryota | 363 | 1.53e-95 | NTclustered | gi|407227484|emb|FR856884.1| | 468664 | g4317 | i0 | 84.197 | 29.3638676844784 | 386 | 47 | 97 | 10 | 13 | 393 | 2211 | 1835 | Philodina citrina complete mitochondrial genome | blastn | 11540 | 363 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Philodinida | Philodinidae | Philodina | Philodina citrina | |
| 9435746 | 9435746 | PRJNA534016_P_NODE_1228_length_744_cov_20.904620_g1144_i0 | PRJNA534016 | 1228 | 744 | 20.90462 | 155.5303728 | Proales similis | 360698 | Rotifera | other_Eukaryota | 569 | 1.6599999999999993e-157 | NTclustered | gi|1859640894|gb|MN970216.1| | 360698 | g1144 | i0 | 84.524 | 49.1129032258064 | 588 | 78 | 78 | 12 | 15 | 595 | 12534 | 11953 | Proales similis mitochondrion, complete genome | blastn | 36540 | 569 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Proalidae | Proales | Proales similis | |
| 10711595 | 10711595 | PRJNA534016_P_NODE_2749_length_493_cov_3.161905_g2659_i0 | PRJNA534016 | 2749 | 493 | 3.161905 | 15.58819165 | Lecane sp. bulla3 | 1225230 | Rotifera | other_Eukaryota | 501 | 3.9799999999999992e-137 | NTclustered | gi|401880173|gb|JX216654.1| | 1225230 | g2659 | i0 | 86.304 | 89.4929006085193 | 460 | 63 | 93 | 0 | 34 | 493 | 2 | 461 | Lecane sp. bulla3 voucher ECOCHZ-AG0937.1 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial | blastn | 44120 | 501 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Lecanidae | Lecane | Lecane sp. bulla3 | |
| 11986259 | 11986259 | PRJNA534016_P_NODE_2050_length_571_cov_2.935743_g1962_i0 | PRJNA534016 | 2050 | 571 | 2.935743 | 16.76309253 | Brachionus rubens | 392764 | Rotifera | other_Eukaryota | 254 | 1.44e-62 | NTclustered | gi|632795126|gb|KJ489417.1| | 392764 | g1962 | i0 | 78.066 | 0.742556917688266 | 424 | 77 | 73 | 16 | 131 | 547 | 9531 | 9945 | Brachionus rubens chromosome I mitochondrion, complete sequence | blastn | 424 | 254 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus rubens | |
| 15146375 | 15146375 | PRJNA534016_P_NODE_9672_length_281_cov_4.721154_g9582_i0 | PRJNA534016 | 9672 | 281 | 4.721154 | 13.26644274 | Ploima | 84394 | Rotifera | other_Eukaryota | 265 | 3.06e-66 | NTclustered | gi|308052235|gb|GU232636.1| | 104777 | g9582 | i0 | 85.271 | 77.3985765124555 | 258 | 36 | 91 | 2 | 24 | 280 | 1 | 257 | Brachionus calyciflorus isolate NC2 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial | blastn | 21749 | 265 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus calyciflorus | |
| 15810263 | 15810263 | PRJNA534016_P_NODE_1793_length_610_cov_3.502793_g1706_i0 | PRJNA534016 | 1793 | 610 | 3.502793 | 21.3670373 | Brachionus rubens | 392764 | Rotifera | other_Eukaryota | 254 | 1.54e-62 | NTclustered | gi|1802791198|gb|MN256531.1| | 392764 | g1706 | i0 | 78.827 | 0.642622950819672 | 392 | 71 | 63 | 12 | 67 | 452 | 10606 | 10221 | Brachionus rubens chromosome I mitochondrion, complete sequence | blastn | 392 | 254 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus rubens | |
| 19633513 | 19633513 | PRJNA534016_P_NODE_1016_length_818_cov_1.421477_g939_i0 | PRJNA534016 | 1016 | 818 | 1.421477 | 11.62768186 | Brachionus calyciflorus | 104777 | Rotifera | other_Eukaryota | 771 | 0 | NTclustered | gi|1143271481|gb|KX822781.1| | 104777 | g939 | i0 | 83.701 | 86.7616136919315 | 816 | 133 | 99 | 0 | 3 | 818 | 26606 | 27421 | Brachionus calyciflorus chromosome I mitochondrion, complete sequence | blastn | 70971 | 771 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus calyciflorus | |
| 20244723 | 20244723 | PRJNA534016_P_NODE_14756_length_249_cov_0.875000_g14666_i0 | PRJNA534016 | 14756 | 249 | 0.875 | 2.17875 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 62.1 | 3.74e-5 | NTclustered | gi|1104767204|gb|KT989538.1| | 10195 | g14666 | i0 | 86.207 | 4.2289156626506 | 58 | 6 | 23 | 2 | 37 | 94 | 1 | 56 | Brachionus plicatilis homeodomain transcription factor Hox2 (Hox2) mRNA, complete cds | blastn | 1053 | 62.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus plicatilis | |
| 20909449 | 20909449 | PRJNA534016_P_NODE_1217_length_747_cov_16.149852_g1135_i0 | PRJNA534016 | 1217 | 747 | 16.149852 | 120.63939444 | Brachionus manjavacas | 667381 | Rotifera | other_Eukaryota | 534 | 6.099999999999998e-147 | NTclustered | gi|2006240385|gb|MW559988.1| | 667381 | g1135 | i0 | 83.761 | 48.6291834002677 | 585 | 73 | 77 | 16 | 141 | 717 | 9935 | 10505 | Brachionus manjavacas isolate DE chromosome I mitochondrion, complete sequence | blastn | 36326 | 534 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus manjavacas | |
| 23459768 | 23459768 | PRJNA534016_P_NODE_2719_length_496_cov_4.468085_g2629_i0 | PRJNA534016 | 2719 | 496 | 4.468085 | 22.1617016 | Philodina citrina | 468664 | Rotifera | other_Eukaryota | 564 | 5.03e-156 | NTclustered | gi|407227484|emb|FR856884.1| | 468664 | g2629 | i0 | 87.627 | 25.1572580645161 | 493 | 51 | 99 | 10 | 4 | 492 | 1908 | 2394 | Philodina citrina complete mitochondrial genome | blastn | 12478 | 564 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Philodinida | Philodinidae | Philodina | Philodina citrina | |
| 24733342 | 24733342 | PRJNA534016_P_NODE_10280_length_277_cov_1.245098_g10190_i0 | PRJNA534016 | 10280 | 277 | 1.245098 | 3.44892146 | Lecane inermis | 1471631 | Rotifera | other_Eukaryota | 289 | 1.78e-73 | NTclustered | gi|1957982515|gb|MW487867.1| | 1471631 | g10190 | i0 | 86.194 | 97.0974729241877 | 268 | 36 | 97 | 1 | 1 | 268 | 394 | 660 | Lecane inermis voucher NNIBRIV50291 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial | blastn | 26896 | 289 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Lecanidae | Lecane | Lecane inermis | |
| 24733463 | 24733463 | PRJNA534016_P_NODE_1960_length_583_cov_2.982353_g1873_i0 | PRJNA534016 | 1960 | 583 | 2.982353 | 17.38711799 | Brachionus angularis | 396692 | Rotifera | other_Eukaryota | 248 | 6.84e-61 | NTclustered | gi|1999716438|gb|MT875426.1| | 396692 | g1873 | i0 | 75.043 | 1.92967409948542 | 585 | 120 | 98 | 21 | 3 | 574 | 6202 | 5631 | Brachionus angularis chromosome II mitochondrion, complete sequence | blastn | 1125 | 248 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Brachionus | Brachionus angularis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;