RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA534016 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17084900 17084900 PRJNA534016_P_NODE_14354_length_250_cov_0.870056_g14264_i0 PRJNA534016 14354 250 0.870056 2.17514 Gilbertella persicaria 101096 Fungi Fungi 200 7.639999999999999e-47   NTclustered gi|2323727788|ref|XM_051577166.1| 101096 g14264 i0 81.818 79.332 242 41 97 1 7 248 284 46 Gilbertella persicaria histone H3 (B0P05DRAFT_533042), mRNA blastn 19833 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
20909510 20909510 PRJNA534016_P_NODE_16257_length_245_cov_1.790698_g16167_i0 PRJNA534016 16257 245 1.790698 4.3872101 Lichtheimia ornata 688661 Fungi Fungi 67.6 7.9e-7   NTclustered gi|2553570039|ref|XM_058484812.1| 688661 g16167 i0 95.238 5.17142857142857 42 2 17 0 103 144 277 318 Lichtheimia ornata uncharacterized protein (O0I10_004760), partial mRNA blastn 1267 67.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;