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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA534016 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
507559 507559 PRJNA534016_P_NODE_17501_length_243_cov_0.905882_g17411_i0 PRJNA534016 17501 243 0.905882 2.20129326 Liolophura japonica 13599 Mollusca Mollusca 248 2.6e-61   NTclustered gi|2724224330|ref|XM_064759144.1| 13599 g17411 i0 85.185 163.711934156379 243 34 99 2 1 242 980 739 PREDICTED: Liolophura japonica polyubiquitin-C (LOC135479320), transcript variant X1, mRNA blastn 39782 248 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
3058496 3058496 PRJNA534016_P_NODE_6843_length_322_cov_3.092369_g6753_i0 PRJNA534016 6843 322 3.092369 9.95742818 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g6753 i0 100 0.093167701863354 30 0 9 0 53 82 48265941 48265970 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
4334480 4334480 PRJNA534016_P_NODE_3304_length_448_cov_2.746667_g3214_i0 PRJNA534016 3304 448 2.746667 12.30506816 Patella vulgata 6465 Mollusca Mollusca 211 6.76e-50   NTclustered gi|2506329556|ref|XM_050549165.2| 6465 g3214 i0 83.333 49.2477678571429 234 34 52 4 112 342 325 556 PREDICTED: Patella vulgata ATP synthase lipid-binding protein, mitochondrial (LOC126820944), mRNA blastn 22063 211 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
6885133 6885133 PRJNA534016_P_NODE_166_length_1713_cov_4.053049_g145_i0 PRJNA534016 166 1713 4.053049 69.42872937 Pecten maximus 6579 Mollusca Mollusca 189 1.2899999999999997e-42   NTclustered gi|1835518101|ref|XM_033876173.1| 6579 g145 i0 80.723 1.37769994162288 249 43 14 5 91 335 4290 4537 PREDICTED: Pecten maximus mucin-2-like (LOC117321667), mRNA blastn 2360 189 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
8160213 8160213 PRJNA534016_P_NODE_12607_length_259_cov_1.241935_g12517_i0 PRJNA534016 12607 259 1.241935 3.21661165 Littorina saxatilis 31220 Mollusca Mollusca 65.8 3.03e-6   NTclustered gi|2868613574|ref|XM_070319664.1| 31220 g12517 i0 97.368 5.13513513513514 38 1 18 0 66 103 1974 1937 PREDICTED: Littorina saxatilis otolith matrix protein OMM-64-like (LOC138948159), mRNA blastn 1330 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
8160228 8160228 PRJNA534016_P_NODE_13907_length_251_cov_0.865169_g13817_i0 PRJNA534016 13907 251 0.865169 2.17157419 Tridacna crocea 80833 Mollusca Mollusca 60.2 1.36e-4   NTclustered gi|1782808694|gb|MK571041.1| 80833 g13817 i0 94.872 12.1474103585657 39 1 15 1 96 133 179 217 Tridacna crocea microsatellite FH120 sequence blastn 3049 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Cardiidae Tridacna Tridacna crocea
11986236 11986236 PRJNA534016_P_NODE_17710_length_242_cov_1.005917_g17620_i0 PRJNA534016 17710 242 1.005917 2.43431914 Ruditapes philippinarum 129788 Mollusca Mollusca 183 7.41e-42   NTclustered gi|2616634475|ref|XM_060735965.1| 129788 g17620 i0 81.14 28.5743801652893 228 43 94 0 3 230 863 1090 PREDICTED: Ruditapes philippinarum pre-B-cell leukemia transcription factor 1-like (LOC132746723), transcript variant X6, mRNA blastn 6915 183 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
11986297 11986297 PRJNA534016_P_NODE_5770_length_347_cov_2.529197_g5680_i0 PRJNA534016 5770 347 2.529197 8.7763135900000009 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.009   NTclustered gi|2912998575|dbj|AP039604.1| 145626 g5680 i0 100 0.0835734870317003 29 0 8 0 177 205 57418393 57418421 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 23, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
13261288 13261288 PRJNA534016_P_NODE_14991_length_248_cov_1.251429_g14901_i0 PRJNA534016 14991 248 1.251429 3.10354392 Haliotis asinina 109174 Mollusca Mollusca 206 1.6299999999999998e-48   NTclustered gi|2793417359|ref|XM_067821588.1| 109174 g14901 i0 83.796 27.2459677419355 216 35 87 0 1 216 958 743 PREDICTED: Haliotis asinina actin, cytoplasmic 1 (LOC137290551), transcript variant X2, mRNA blastn 6757 206 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
13261372 13261372 PRJNA534016_P_NODE_2951_length_477_cov_1.534653_g2861_i0 PRJNA534016 2951 477 1.534653 7.32029481 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.013   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g2861 i0 90.698 0.090146750524109 43 1 8 3 212 251 5914569 5914611 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 43 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
14536380 14536380 PRJNA534016_P_NODE_4232_length_401_cov_1.731707_g4142_i0 PRJNA534016 4232 401 1.731707 6.94414507 Amplirhagada cf. alkuonides WAM S37656 1580562 Mollusca Mollusca 67.6 1.37e-6   NTclustered gi|730451398|gb|KP085045.1| 1580562 g4142 i0 74.332 0.536159600997506 187 34 45 10 109 290 324 501 Amplirhagada cf. alkuonides WAM S37656 clone a 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 215 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Amplirhagada Amplirhagada cf. alkuonides WAM S37656
17085064 17085064 PRJNA534016_P_NODE_9614_length_282_cov_1.473684_g9524_i0 PRJNA534016 9614 282 1.473684 4.15578888 Physella acuta 109671 Mollusca Mollusca 52.8 0.026   NTclustered gi|2572364530|ref|XM_059307898.1| 109671 g9524 i0 100 0.099290780141844 28 0 10 0 160 187 1203 1176 PREDICTED: Physella acuta putative G-protein coupled receptor F59B2.13 (LOC131946898), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
20909652 20909652 PRJNA534016_P_NODE_9557_length_282_cov_2.540670_g9467_i0 PRJNA534016 9557 282 2.54067 7.1646894 Bradybaena similaris 145626 Mollusca Mollusca 58.4 5.59e-4   NTclustered gi|2912993551|dbj|AP039598.1| 145626 g9467 i0 100 0.315602836879433 31 0 11 0 54 84 45907268 45907298 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 17, sequence blastn 89 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23459683 23459683 PRJNA534016_P_NODE_1459_length_679_cov_5.894389_g1374_i0 PRJNA534016 1459 679 5.894389 40.02290131 Dreissena polymorpha 45954 Mollusca Mollusca 104 1.84e-17   NTclustered gi|2364268467|ref|XM_052408548.1| 45954 g1374 i0 88.372 1.38144329896907 86 10 13 0 310 395 2226 2311 PREDICTED: Dreissena polymorpha uncharacterized LOC127867416 (LOC127867416), mRNA blastn 938 104 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
24733500 24733500 PRJNA534016_P_NODE_4600_length_385_cov_1.804487_g4510_i0 PRJNA534016 4600 385 1.804487 6.94727495 Littorina saxatilis 31220 Mollusca Mollusca 52.8 0.037   NTclustered gi|2868658951|ref|XM_070332232.1| 31220 g4510 i0 96.774 0.161038961038961 31 1 8 0 138 168 3240 3210 PREDICTED: Littorina saxatilis DNA excision repair protein ERCC-6-like (LOC138960349), transcript variant X1, mRNA blastn 62 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;