RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA534016 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14536327 14536327 PRJNA534016_P_NODE_17152_length_243_cov_2.264706_g17062_i0 PRJNA534016 17152 243 2.264706 5.50323558 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 174 4.48e-39   NTclustered gi|2729095666|ref|XM_065210682.1| 499914 g17062 i0 80 10.0041152263374 245 42 99 6 3 243 388 147 PREDICTED: Rhopilema esculentum ras-related protein Rab-7a (LOC135692525), mRNA blastn 2431 174 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
17696185 17696185 PRJNA534016_P_NODE_10414_length_276_cov_1.270936_g10324_i0 PRJNA534016 10414 276 1.270936 3.50778336 Pocillopora 46730 Cnidaria other_Eukaryota 220 6.57e-53   NTclustered gi|1524887664|ref|XM_027195913.1| 46731 g10324 i0 81.685 13.3224637681159 273 42 97 8 9 276 76 345 PREDICTED: Pocillopora damicornis ras-related protein Rab-3-like (LOC113678989), mRNA blastn 3677 220 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
23459771 23459771 PRJNA534016_P_NODE_2999_length_472_cov_1.533835_g2909_i0 PRJNA534016 2999 472 1.533835 7.2397012 Hydra vulgaris 6087 Cnidaria other_Eukaryota 58.4 0.001   NTclustered gi|2744872896|ref|XM_065803034.1| 6087 g2909 i0 94.595 0.0783898305084746 37 2 8 0 11 47 984 1020 PREDICTED: Hydra vulgaris probable ATP-dependent RNA helicase DDX47 (LOC100197156), transcript variant X2, mRNA blastn 37 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
24733380 24733380 PRJNA534016_P_NODE_14100_length_250_cov_0.870056_g14010_i0 PRJNA534016 14100 250 0.870056 2.17514 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g14010 i0 100 0.232 29 0 12 0 64 92 3990384 3990356 Anemonia sulcata genome assembly, chromosome: 3 blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;