RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA534016 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3058375 3058375 PRJNA534016_P_NODE_16243_length_245_cov_2.209302_g16153_i0 PRJNA534016 16243 245 2.209302 5.4127899 Pisolithus orientalis 936130 Fungi Fungi 65.8 2.84e-6   NTclustered gi|2325053199|ref|XM_051746077.1| 936130 g16153 i0 81.707 0.33469387755102 82 11 33 4 128 207 2623 2544 Pisolithus orientalis salt tolerance down-regulator-domain-containing protein (F5J12DRAFT_839508), mRNA blastn 82 65.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Pisolithaceae Pisolithus Pisolithus orientalis
4334429 4334429 PRJNA534016_P_NODE_17104_length_244_cov_0.865497_g17014_i0 PRJNA534016 17104 244 0.865497 2.11181268 Malassezia restricta 76775 Fungi Fungi 440 4.019999999999999e-119   NTclustered gi|1546637143|ref|XM_027630214.1| 76775 g17014 i0 99.18 1.82786885245902 244 2 100 0 1 244 33 276 Malassezia restricta lipid transfer protein (MRET_3587), partial mRNA blastn 446 440 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6221904 6221904 PRJNA534016_P_NODE_3185_length_458_cov_1.200000_g3095_i0 PRJNA534016 3185 458 1.2 5.496 root 1 Root_unresolved Root_unresolved 54.7 0.012   NTclustered gi|2491063213|gb|CP122433.1| 5207 g3095 i0 100 2.64847161572052 29 0 6 0 370 398 608420 608392 Cryptococcus neoformans isolate IUM96-2828 blastn 1213 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
11321334 11321334 PRJNA534016_P_NODE_16389_length_245_cov_0.895349_g16299_i0 PRJNA534016 16389 245 0.895349 2.19360505 Cryptococcus 5206 Fungi Fungi 453 5.1900000000000006e-123   NTclustered gi|1376261204|ref|XM_567977.2| 214684 g16299 i0 100 10.4734693877551 245 0 100 0 1 245 26 270 Cryptococcus neoformans var. neoformans JEC21 bud site selection-related protein, putative (CNL04250), mRNA blastn 2566 453 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus deneoformans
15810265 15810265 PRJNA534016_P_NODE_18113_length_241_cov_1.708333_g18023_i0 PRJNA534016 18113 241 1.708333 4.11708253 Malassezia globosa 76773 Fungi Fungi 412 8.64e-111   NTclustered gi|164659775|ref|XM_001730960.1| 425265 g18023 i0 97.51 1 241 6 100 0 1 241 113 353 Malassezia globosa CBS 7966 uncharacterized protein (MGL_2011), partial mRNA blastn 241 412 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
23459649 23459649 PRJNA534016_P_NODE_11139_length_270_cov_1.543147_g11049_i0 PRJNA534016 11139 270 1.543147 4.1664969 Malassezia restricta 76775 Fungi Fungi 499 7.349999999999998e-137   NTclustered gi|1546631754|ref|XM_027627537.1| 76775 g11049 i0 100 3.03333333333333 270 0 100 0 1 270 553 822 Malassezia restricta methylenetetrahydrofolate reductase (NADPH) (MRET_0910), partial mRNA blastn 819 499 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;