contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA534016" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5611200 | 5611200 | PRJNA534016_P_NODE_10685_length_273_cov_5.655000_g10595_i0 | PRJNA534016 | 10685 | 273 | 5.655 | 15.43815 | Macrococcus epidermidis | 1902580 | Bacteria | Bacteria | 100 | 8.82e-17 | NTclustered | gi|2269510951|gb|CP073819.1| | 1902580 | g10595 | i0 | 81.667 | 0.43956043956044 | 120 | 22 | 44 | 0 | 146 | 265 | 2060161 | 2060280 | Macrococcus epidermidis strain Epi3002-OL chromosome, complete genome | blastn | 120 | 100 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Macrococcus | Macrococcus epidermidis | ||
| 5611386 | 5611386 | PRJNA534016_P_NODE_7445_length_310_cov_2.704641_g7355_i0 | PRJNA534016 | 7445 | 310 | 2.704641 | 8.3843871 | Eubacteriaceae bacterium ES3 | 3064258 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|2556637776|gb|CP130741.1| | 3064258 | g7355 | i0 | 96.875 | 0.103225806451613 | 32 | 0 | 10 | 1 | 1 | 31 | 57466 | 57497 | Eubacteriaceae bacterium ES3 chromosome, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriaceae | Eubacteriaceae bacterium ES3 | |||
| 6885054 | 6885054 | PRJNA534016_P_NODE_11446_length_267_cov_3.788660_g11356_i0 | PRJNA534016 | 11446 | 267 | 3.78866 | 10.1157222 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 472 | 1.5799999999999998e-128 | NTclustered | gi|2811870118|gb|CP170248.1| | 1282 | g11356 | i0 | 98.502 | 317.202247191011 | 267 | 4 | 100 | 0 | 1 | 267 | 1210488 | 1210754 | Staphylococcus epidermidis strain PS25 chromosome, complete genome | blastn | 84693 | 472 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8160189 | 8160189 | PRJNA534016_P_NODE_10367_length_276_cov_1.738916_g10277_i0 | PRJNA534016 | 10367 | 276 | 1.738916 | 4.79940816 | Selenomonas sputigena | 69823 | Bacteria | Bacteria | 488 | 1.6299999999999995e-133 | NTclustered | gi|329745630|gb|CP002637.1| | 546271 | g10277 | i0 | 98.551 | 68.9927536231884 | 276 | 4 | 100 | 0 | 1 | 276 | 930364 | 930639 | Selenomonas sputigena ATCC 35185, complete genome | blastn | 19042 | 488 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Selenomonadales | Selenomonadaceae | Selenomonas | Selenomonas sputigena | ||
| 8771317 | 8771317 | PRJNA534016_P_NODE_18687_length_237_cov_2.414634_g18597_i0 | PRJNA534016 | 18687 | 237 | 2.414634 | 5.72268258 | Streptococcus | 1301 | Bacteria | Bacteria | 433 | 6.5e-117 | NTclustered | gi|1403375826|emb|LS483375.1| | 1302 | g18597 | i0 | 99.578 | 327 | 237 | 1 | 100 | 0 | 1 | 237 | 625475 | 625239 | Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1 | blastn | 77499 | 433 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus gordonii | ||
| 9435896 | 9435896 | PRJNA534016_P_NODE_6828_length_323_cov_1.156000_g6738_i0 | PRJNA534016 | 6828 | 323 | 1.156 | 3.73388 | Lachnospiraceae bacterium oral taxon 500 | 712991 | Bacteria | Bacteria | 586 | 6.72e-163 | NTclustered | gi|1359148129|gb|CP027241.1| | 712991 | g6738 | i0 | 99.381 | 348.120743034056 | 323 | 2 | 100 | 0 | 1 | 323 | 369748 | 369426 | Lachnospiraceae bacterium oral taxon 500 strain W11650 chromosome, complete genome | blastn | 112443 | 586 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium oral taxon 500 | |||
| 11321337 | 11321337 | PRJNA534016_P_NODE_17149_length_243_cov_2.276471_g17059_i0 | PRJNA534016 | 17149 | 243 | 2.276471 | 5.53182453 | Enterococcus | 1350 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2706656888|dbj|AP031371.1| | 37734 | g17059 | i0 | 100 | 19.843621399177 | 243 | 0 | 100 | 0 | 1 | 243 | 869142 | 868900 | Enterococcus casseliflavus KB1733 DNA, complete genome | blastn | 4822 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus casseliflavus | ||
| 12597284 | 12597284 | PRJNA534016_P_NODE_8810_length_288_cov_2.376744_g8720_i0 | PRJNA534016 | 8810 | 288 | 2.376744 | 6.84502272 | Tepidanaerobacter | 499228 | Bacteria | Bacteria | 165 | 3.28e-36 | NTclustered | gi|470488597|ref|NR_076880.1| | 499229 | g8720 | i0 | 83.799 | 267.847222222222 | 179 | 24 | 61 | 5 | 97 | 273 | 274 | 99 | Tepidanaerobacter acetatoxydans strain Re1 23S ribosomal RNA gene, complete sequence | blastn | 77140 | 165 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Thermosediminibacterales | Tepidanaerobacteraceae | Tepidanaerobacter | Tepidanaerobacter acetatoxydans | ||
| 13261346 | 13261346 | PRJNA534016_P_NODE_18451_length_241_cov_0.916667_g18361_i0 | PRJNA534016 | 18451 | 241 | 0.916667 | 2.20916747 | Allobacillus halotolerans | 570278 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2446175568|gb|CP117968.1| | 570278 | g18361 | i0 | 100 | 0.116182572614108 | 28 | 0 | 12 | 0 | 70 | 97 | 856163 | 856190 | Allobacillus halotolerans strain BCRC 17939 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Allobacillus | Allobacillus halotolerans | ||
| 14536280 | 14536280 | PRJNA534016_P_NODE_14132_length_250_cov_0.870056_g14042_i0 | PRJNA534016 | 14132 | 250 | 0.870056 | 2.17514 | Eubacterium limosum | 1736 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2833687129|gb|CP171347.1| | 1736 | g14042 | i0 | 100 | 12 | 250 | 0 | 100 | 0 | 1 | 250 | 1663042 | 1662793 | Eubacterium limosum strain El1405 chromosome, complete genome | blastn | 3000 | 462 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriaceae | Eubacterium | Eubacterium limosum | ||
| 14536436 | 14536436 | PRJNA534016_P_NODE_9712_length_281_cov_1.754808_g9622_i0 | PRJNA534016 | 9712 | 281 | 1.754808 | 4.93101048 | Clostridium estertheticum | 238834 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2557245743|gb|CP077618.1| | 238834 | g9622 | i0 | 97.059 | 0.241992882562278 | 34 | 0 | 12 | 1 | 54 | 87 | 1694457 | 1694489 | Clostridium estertheticum strain CF007 chromosome, complete genome | blastn | 68 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium estertheticum | ||
| 15810156 | 15810156 | PRJNA534016_P_NODE_10253_length_277_cov_1.490196_g10163_i0 | PRJNA534016 | 10253 | 277 | 1.490196 | 4.12784292 | Peribacillus frigoritolerans | 450367 | Bacteria | Bacteria | 62.1 | 4.23e-5 | NTclustered | gi|2257755478|gb|CP085514.1| | 450367 | g10163 | i0 | 89.796 | 0.277978339350181 | 49 | 4 | 18 | 1 | 4 | 52 | 4985049 | 4985096 | Peribacillus frigoritolerans strain KF19 chromosome, complete genome | blastn | 77 | 62.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Peribacillus | Peribacillus frigoritolerans | ||
| 17084852 | 17084852 | PRJNA534016_P_NODE_11074_length_270_cov_2.873096_g10984_i0 | PRJNA534016 | 11074 | 270 | 2.873096 | 7.7573592 | Oceanirhabdus sp. W0125-5 | 2999116 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|2429794163|gb|CP115913.1| | 2999116 | g10984 | i0 | 100 | 0.103703703703704 | 28 | 0 | 10 | 0 | 54 | 81 | 311084 | 311111 | Oceanirhabdus sp. W0125-5 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Oceanirhabdus | Oceanirhabdus sp. W0125-5 | ||
| 17696225 | 17696225 | PRJNA534016_P_NODE_19054_length_228_cov_4.032258_g18964_i0 | PRJNA534016 | 19054 | 228 | 4.032258 | 9.19354824 | Paenibacillus | 44249 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|920787514|gb|CP011512.1| | 59893 | g18964 | i0 | 100 | 0.245614035087719 | 28 | 0 | 12 | 0 | 8 | 35 | 1643744 | 1643771 | Paenibacillus peoriae strain HS311, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus peoriae | ||
| 22795469 | 22795469 | PRJNA534016_P_NODE_3158_length_459_cov_2.613990_g3068_i0 | PRJNA534016 | 3158 | 459 | 2.61399 | 11.9982141 | Erysipelotrichaceae | 128827 | Bacteria | Bacteria | 584 | 3.5499999999999986e-162 | NTclustered | gi|1802450212|dbj|AP019711.1| | 2583452 | g3068 | i0 | 89.76 | 554.958605664488 | 459 | 44 | 99 | 3 | 2 | 459 | 294340 | 294796 | Amedibacterium intestinale DNA, complete genome | blastn | 254726 | 584 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Amedibacterium | Amedibacterium intestinale | ||
| 22795480 | 22795480 | PRJNA534016_P_NODE_8598_length_290_cov_1.774194_g8508_i0 | PRJNA534016 | 8598 | 290 | 1.774194 | 5.1451626 | Streptococcus | 1301 | Bacteria | Bacteria | 531 | 2.83e-146 | NTclustered | gi|2179899321|gb|CP046523.1| | 1303 | g8508 | i0 | 99.655 | 333.068965517241 | 290 | 1 | 100 | 0 | 1 | 290 | 17291 | 17002 | Streptococcus oralis strain SOD chromosome, complete genome | blastn | 96590 | 531 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;